Ectopseudomonas mendocina NK-01: MDS_1373
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Entry
MDS_1373 CDS
T01473
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk00260
Glycine, serine and threonine metabolism
pmk00460
Cyanoamino acid metabolism
pmk00630
Glyoxylate and dicarboxylate metabolism
pmk00670
One carbon pool by folate
pmk00680
Methane metabolism
pmk01100
Metabolic pathways
pmk01110
Biosynthesis of secondary metabolites
pmk01120
Microbial metabolism in diverse environments
pmk01200
Carbon metabolism
pmk01230
Biosynthesis of amino acids
pmk01240
Biosynthesis of cofactors
pmk04981
Folate transport and metabolism
Module
pmk_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MDS_1373
09102 Energy metabolism
00680 Methane metabolism
MDS_1373
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MDS_1373
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
MDS_1373
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
MDS_1373
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
MDS_1373
Enzymes [BR:
pmk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
MDS_1373
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
Aminotran_5
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AEB57404
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Position
complement(1492695..1493948)
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AA seq
417 aa
AA seq
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MFSKHDQLQGYDDALLAAIQAEEQRQEDHIELIASENYCSQRVMQAQGSGLTNKYAEGYP
GKRYYGGCEHVDKVEALAIERAKQLFGADYANVQPHSGSSANAAVYLALLNAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGIDENGLIDYDEVERLAVEHKPKMIVAGFSAYSRV
LDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPVPFADVVTTTTHKTLRGPRGGLIL
ARKNEEIEKKLNSAVFPGAQGGPLMHVIAAKAVCFKEALEPGFKTYQQQVIDNARAMAAV
FVERGYDVVSGGTDNHLMLISLVKQGLTGKAADAALGDAHITVNKNAVPNDPQSPFVTSG
IRIGTPAVTTRGFKEGECRTLAGWICDILDDLENPAVIERVRGQVADLCTTFPVYAD
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcacgaccaactgcaaggctatgacgacgccctgctcgcggcgatccag
gccgaagaacagcgccaggaagaccatatcgagctgatcgcctcggagaactactgcagc
cagcgcgtcatgcaggcgcaaggcagcggcctgaccaacaagtacgccgaaggctatccg
ggcaagcgctactacggcggttgcgagcatgtggacaaggtcgaggcgctggccatcgag
cgcgccaagcagctgttcggcgccgactacgccaacgtccagccgcactccggttcgtcc
gccaacgccgctgtttacctggcgctgctcaacgcgggtgacaccattctcggcatgagc
ctggcacatggcggccacctgacccacggcgccaaggtgtcgtcctcgggcaagctgtac
aacgccgtgcaatacggcatcgacgagaacggcctgatcgattacgacgaagtcgagcgc
ctggccgtcgagcacaagccgaagatgatcgtcgccggcttctcggcctactcgcgcgtg
ctggacttcccgcgtttccgcgccatcgccgacaaggttggcgcactgctgttcgtcgac
atggctcacgttgcgggcctggtcgctgccggtctgtacccaaacccggtaccgttcgcc
gatgtggtcaccaccaccacgcacaagaccctgcgcggcccgcggggcggcctgatcctg
gcgcgcaagaacgaggagatcgagaaaaaactcaactccgccgtcttccccggcgcccag
ggcggcccgctgatgcacgtgatcgcggccaaggcggtgtgcttcaaggaagcactggag
ccgggcttcaagacctaccagcagcaagtgatcgacaatgcccgcgccatggcggcggtg
ttcgtcgagcgcggctatgacgtggtctccggcggtaccgacaaccacctgatgctgatc
agtctggtcaagcagggcctgaccggcaaagcggccgacgcggcgctgggcgatgctcac
atcaccgtgaacaagaacgccgtgccgaacgacccccagtcgccgttcgtcacctccggc
atccgcatcggtaccccggcggtgaccactcgcggcttcaaggaaggcgaatgccgcacc
ttggccggctggatctgcgacatcctcgacgacctggaaaacccggccgtgatcgagcgc
gtgcgcggccaggtcgccgacctgtgcaccaccttcccggtctacgctgactga
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