Ectopseudomonas mendocina NK-01: MDS_1426
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Entry
MDS_1426 CDS
T01473
Name
(GenBank) ABC transporter-like protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MDS_1426
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmk02000
]
MDS_1426
02044 Secretion system [BR:
pmk02044
]
MDS_1426
Transporters [BR:
pmk02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
MDS_1426
Secretion system [BR:
pmk02044
]
Type I secretion system
Adhesin protein transporter
MDS_1426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
DUF87
MMR_HSR1
Zeta_toxin
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AEB57457
LinkDB
All DBs
Position
1567101..1569257
Genome browser
AA seq
718 aa
AA seq
DB search
MDPQAGRVESNSDPRGQHDDPLLDSLLSLCVLHRKPANRAMLTSGLPLPKQRLTAELLPR
AAARAGLQGRLLRRSLEQIPKIALPALLLLKEGRCAVLLGWSEQGDARLLLSESDGGEVK
VARDLLLEDFSGQVFFAQPQHKYDLDQGSLIPRTQSWFRDTLKRSRWLYMDAVAASLLIN
LIGLGAPLFVMNVYDRVVPNQAAATLWVLAIGISGAYVFDLLLKTMRGLCLDLAGKKTDL
IISATLFERIVGMAMKFRPQRVGSFAQNIHEFQTLRDFLASLTLTSVIDLPFTLLILLVI
GLLGGHLVWIPLLAFPLAMGISWLLQKPLVATMDRTMALAAERQSSLIETLAGLDAVKVN
NAESDRQYLWEQTIGTLGRLELRVKMLSSLAMNLTMLIQQLAGVIMIVAGVYLIMAGDLS
MGGLIACYMLNGRALGPLSQLSGLFTRYQQARLTMINVDQMMDLPQERHEGEQPLVRAKL
QGSLELRQVSFTYPHQQSPALSEINLIVRPGEKIGIIGRSGSGKSSLAKLIVGLYQADSG
SLLIDGTDIRQLDISELRHNIGYVPQDIQLFSGTLRENLMAGARYVEDELVLQASELAGV
HEFARLHAQGYELQVGERGQNLSGGQRQNVALARALLLDPPILLLDEPTSSMDNPGEERL
KERIGAVIANKTLLLVTHRASMLSLVDRLLIVDRGRIIADGPKESVMEALKKGQISVA
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
gtggatccacaagccggtcgtgtcgaaagcaactccgatcctcgcgggcagcatgatgat
ccgctgctggactcgctcctttctctctgtgtcctgcaccgcaagccggccaatcgggcc
atgctcaccagtggcctgccactgcccaagcaacgcctgacggcagagttgcttccgcga
gccgctgctcgtgccggtttgcaggggcgcctgctgcgcagaagtctcgagcagattccg
aaaatcgcactccctgccttgctgctgctcaaggaggggcgttgtgccgtgctgctgggc
tggagcgaacagggcgacgctcgcctgctgctcagcgaaagcgatggcggcgaggttaag
gtcgcccgcgacctactgctcgaggatttcagtggccaggtcttctttgcccagccgcag
cacaagtacgacctagaccagggcagcctgatcccgcggacccagtcctggttccgcgat
accctcaagcgctcgcgctggctatacatggatgccgtggcggccagcctgctgatcaac
ctgatcggcctcggcgcgccgttgttcgtgatgaacgtctatgaccgcgtggtgcccaac
caggccgctgccacgttgtgggtactggccattggtatctccggtgcctatgtcttcgat
ctactgctcaagaccatgcgtgggttgtgtctcgatctggccggcaagaagaccgacctg
atcatctcagccacgttgttcgaacgcatcgtcggcatggccatgaaattccggccgcag
cgggtcggcagcttcgctcagaacattcacgagtttcagacgctgcgcgattttctggct
tcgctgacgctgaccagcgtcattgacctgccattcaccttgttgatcctgctggtgatc
ggcctgctcggcgggcatctggtgtggattccactgctggccttccccttggcgatgggc
atcagctggctgctgcagaagcccttggtggccaccatggatcgcaccatggccctggct
gccgagcgtcagtccagcctgatcgagaccctggccggcctcgatgcggtgaaggtgaac
aacgccgaaagcgaccgccagtatctctgggagcagaccatcggcacgctggggcgcctg
gaactgcgggtcaagatgctgtcgagcctggcgatgaacctcaccatgctgattcagcag
ctggccggggtgatcatgatcgttgccggtgtctacctgatcatggccggtgacctgagc
atggggggcctgatcgcctgctatatgctcaatggccgcgccctggggccgctgagccag
ctctccggtctgttcacccgctaccagcaagcgcgcctgaccatgatcaacgtcgaccag
atgatggatctgccgcaggagcgccacgagggtgagcagccgctggttcgtgccaagctg
cagggcagcctggagttgcgccaggtcagctttacctatccgcaccagcagagccccgcg
ctcagcgagatcaacctgatcgttcggccgggcgagaagatcggcatcatcggccgcagt
ggttcaggcaagagttcgctggccaagttgatcgtcggcctgtaccaggccgactcggga
agcctgctgatcgacggtaccgatatccgccagttggacatcagcgagttgcgccacaac
atcggctacgtgcctcaggacatccagctgttcagcggcaccctgcgcgaaaacctgatg
gccggtgcccgctacgtcgaggacgagttggtgttgcaggcctcggagttggcaggggtc
catgagttcgcgcgcctgcatgcacaaggctatgaactgcaggtcggtgagcgcgggcag
aacctgtccggtggccagcggcagaacgttgcgctggcgcgcgcgctgttgcttgatccg
ccgatcctgctgctggatgaaccgaccagttccatggacaacccgggcgaagagcgcctg
aaggagcgtatcggtgcagtcatcgctaacaagacgctgctgttggtgacacatcgcgcg
tccatgctgtcgctggtcgatcgtcttctgatcgtcgaccgtggccgcatcattgccgat
ggtcccaaggagtcggtcatggaagcactgaagaaggggcagatcagtgtcgcttaa
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