Ectopseudomonas mendocina NK-01: MDS_1436
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Entry
MDS_1436 CDS
T01473
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MDS_1436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmk03400
]
MDS_1436
Enzymes [BR:
pmk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MDS_1436
DNA repair and recombination proteins [BR:
pmk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MDS_1436
Prokaryotic type
MDS_1436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEB57467
LinkDB
All DBs
Position
1579782..1580471
Genome browser
AA seq
229 aa
AA seq
DB search
MTEDRIKLEASWKEALREEFDKPYMKELREFLRAEKAAGKEIYPPGPLIFNALNSTPLDQ
VKVVIIGQDPYHGPGQAHGLCFSVQPGVQTPPSLVNIYKELKRDLNIDIPAHGYLQSWAD
QGVLLLNTSLTVERANAGSHANKGWQFFTDRVIEVVSEHQPKLVFLLWGSHAQSKQRLID
PTKHLVLRSPHPSPLSAHRGFIGNGHFSRCNQFLSQNGMTPIDWQLPPL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagatcgcatcaaactcgaagccagctggaaggaagcgctgcgcgaggagttc
gacaagccctacatgaaggagctgcgcgagttcctgcgggcagagaaggcggctggcaag
gaaatctacccgccgggtccgctgatcttcaatgcgctcaattccacgccgcttgatcag
gtcaaggtggtgatcatcggacaggacccctaccacggcccgggccaggcgcacggcttg
tgcttctcggtgcagccgggcgtgcaaacgccgccgtcgctggtgaatatctacaaggag
ctcaagcgcgatctcaatatcgacatcccggcccacggttatctgcagagttgggccgac
cagggcgtgctgttgctcaacacgtccctgaccgtggaacgtgccaatgccggctcgcac
gcgaacaagggctggcagttctttaccgaccgggtgatcgaagtggtcagtgaacatcag
cccaagctggtgttcctgctctggggtagccacgcgcagagcaagcagcgtctgatcgac
ccgaccaagcacctagtgctgcgctcgccgcacccgtctccgctgtccgcgcatcgtggt
ttcatcggcaatggtcatttcagtcgctgcaaccagttcctcagccagaacggtatgact
cccatcgactggcagttgccaccgctttga
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