Ectopseudomonas mendocina NK-01: MDS_1541
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Entry
MDS_1541 CDS
T01473
Name
(GenBank) ATP-dependent helicase HepA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pmk
Ectopseudomonas mendocina NK-01
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmk03021
]
MDS_1541
Transcription machinery [BR:
pmk03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
MDS_1541
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
PRKG1_interact
Motif
Other DBs
NCBI-ProteinID:
AEB57572
LinkDB
All DBs
Position
complement(1679040..1681883)
Genome browser
AA seq
947 aa
AA seq
DB search
MAQYQPGQRWISDSEAELGLGTILAEDGRLLTVLYPATGETRQYATRNAPLTRVRFAPGD
EITHFEGWKLTVQEVEDVDGLLVYHGLNAQHQPVTMPETQLSNFIQFRLASDRLFAGQID
PLAWFALRYHSLEHNSRLLQSSLWGLGGARAQPIAHQLHIAREVADRIAPRVLLADEVGL
GKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLDVALFDAERFMESDAS
NPFEDCQLALVALEWLKDDEKAQDALFAAGWDLLVVDEAHHLVWHPEQASAEYSLVEQLA
EVIPGVLLLTATPEQLGQDSHFARLRLLDPARFHDLEAFRAESSQYRPVAEAVQELLDQG
KLSAQARDAIGSFLGEEGRELLDAVDSGDDDARARLVRELLDRHGTGRLLFRNTRAAVQG
FPERELHPYPLPSPDEYLELPLGEHAELYPEVSYQAQEEVDDEQRWWRIDPRVEWLIDTL
KMLKKFKVLVICAHAETALDLEDALRVRSGIPATVFHEGMSILERDRAAAYFADEEFGAQ
VLICSEIGSEGRNFQFAHHLVLFDLPAHPDLLEQRIGRLDRIGQKHRIQLHVPYLENSPQ
ERLFQWYHQALNAFLATCPTGNALQHQFGPRLLPLLENGDDGQWQQLVEEATAERIRLEG
ELHSGRDRLLELNSGGAGEGEALVEAILEQDDQFTLPIYMEELFNAFGIDSEDHSDNALI
LRPSEKMLDASFPLGDDEAVTITYDREQALAREDMQFLTWEHPMVQGGMDLVLSGSMGNT
AVALIKNKALKPGTVLLELLYVSEVVGPRKLQLGRFLPPAALRCLLDANGNDLAPKVGFE
TLNDQLESVPRASANKFVQAQRDVLAKQINDAEAKVMPRHVERVAEAKRRLIAELDEELA
RLVALRAVNPSVRDSEIDSLREQREQSLAMFDKAALRLEAIRVLVAG
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtatcaaccggggcaacgctggatcagtgacagcgaagcggaattgggtttg
ggaaccatcctcgccgaggacggccgcctgctcaccgtgctctacccggccaccggcgaa
acccgccagtacgctacgcgcaatgccccactgacccgtgtgcgcttcgctccgggtgac
gagatcacccatttcgaaggctggaagctcaccgtgcaggaagtcgaggacgtcgacggt
ctgctggtctaccacggtctcaatgctcagcaccagccggtcaccatgccggaaacccag
ctgtcgaacttcatccagttccgcctggccagcgaccgtctgttcgctggccagatagac
ccgctggcctggttcgccctgcgctatcacagcctggagcataacagccgcctgctgcag
tcgtccctctggggcctgggcggcgcccgcgcacaaccgatcgcccaccaattgcatatc
gcccgtgaagtggccgaccgcatcgccccgcgcgtactgctggccgacgaagtgggcctg
ggcaagaccatcgaggccggtctggtgatccatcgccaattgctctccggccgcgccagc
cgcgtgctgatcctggtaccggaaaacctgcagcaccagtggctggtggagatgcgccgt
cgcttcaacctcgatgtcgcgctgttcgacgccgagcgcttcatggagagcgacgccagc
aaccccttcgaggactgccagttggcgctggtcgccctggagtggctgaaggacgacgag
aaagcccaggacgcgctgttcgccgccggctgggacctgctggtggtcgacgaagcccac
cacctggtctggcacccggaacaggccagcgccgaatattcgctggtcgagcaactggcc
gaggtcatccccggcgtgctgctgctcaccgccaccccggaacagctcggccaggacagt
cacttcgctcgcctgcgtctgctcgacccagcccgtttccacgacctggaagccttccgc
gccgaaagcagccagtaccgcccggttgccgaggccgtgcaggagctgctcgatcagggc
aagctcagcgcccaggcccgcgacgccatcggcagtttcctcggcgaagagggccgcgag
ctgctcgatgccgtagacagcggcgatgatgacgcccgcgcccgcctggtacgcgaactg
ttggaccgccatggcaccggccgcctgctgttccgcaacacccgcgccgccgtgcagggc
ttccccgagcgtgagttgcacccctacccgctgccgagtccggacgagtacctggagctg
ccactgggcgagcatgccgagctgtacccggaagtcagctaccaggcgcaggaagaagtc
gacgacgagcagcgctggtggcgcatcgatccgcgcgtcgagtggctgatcgacaccctg
aagatgctgaaaaaattcaaggtgctggtgatctgcgcccacgccgaaaccgcactggac
ctggaagacgccctgcgcgtgcgctccggcatcccggccacggtgttccatgagggcatg
agcatcctcgagcgcgaccgcgctgccgcctacttcgccgacgaagagttcggcgcccag
gtgctgatctgctcggaaatcggctccgaaggccgcaacttccagttcgcccatcacctg
gtgttgttcgacctgccggcgcacccggacctgctcgaacagcgcatcggtcgtctcgac
cgtatcggccagaaacaccgcatccagctgcacgtgccgtacctggagaacagcccgcag
gagcgcctgttccagtggtaccatcaggcgctgaatgccttcctggccacctgccccacc
ggcaacgccctgcagcaccagttcggcccacgcctgctgccgctgctggaaaacggcgac
gacggccagtggcaacaactggtggaggaagccaccgccgagcgcattcgcctcgagggc
gagctgcacagcggtcgcgaccgcctgctggagctgaactccggcggtgcgggtgaaggc
gaagcactggtcgaggcgatcctcgagcaggatgaccagttcaccctgccgatctacatg
gaagagctgttcaacgccttcggcatcgacagcgaagaccactccgacaatgccctgatc
ctgcgtcccagcgagaagatgctggacgccagcttcccgctgggcgacgacgaggcggtg
accatcacctacgaccgcgagcaggcgctggcccgcgaggacatgcagttcctcacctgg
gaacaccccatggtgcagggcggcatggacctggtgctgtccggctcgatgggcaacact
gcggtggcgctgatcaagaacaaggcgctcaaacccggtaccgtgctgctggagctgctc
tacgtcagcgaagtggtcggcccgcgcaagctgcagctcggccgcttcctgccaccggct
gcgctgcgctgcctgctcgacgccaatggcaacgaccttgcacccaaggtcggtttcgaa
acgctcaacgatcagcttgaaagcgtgccgcgcgccagcgccaacaagttcgtccaggcc
cagcgcgacgtactggccaagcagatcaacgacgccgaagccaaggtcatgccgcgccat
gtcgaacgcgtcgccgaggccaaacgccgcctgatcgccgaactggacgaagaactggcg
cgcctggtcgccctgcgcgcggtcaacccaagcgtacgtgacagcgagatcgactccttg
cgcgagcagcgcgaacagagcctggcgatgttcgacaaggctgccctgcgcctggaagcg
attcgcgtgctggtcgcgggctaa
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