Ectopseudomonas mendocina NK-01: MDS_1554
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Entry
MDS_1554 CDS
T01473
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk00061
Fatty acid biosynthesis
pmk00071
Fatty acid degradation
pmk01100
Metabolic pathways
pmk01212
Fatty acid metabolism
pmk02024
Quorum sensing
pmk04146
Peroxisome
Module
pmk_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MDS_1554
00071 Fatty acid degradation
MDS_1554
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MDS_1554
09145 Cellular community - prokaryotes
02024 Quorum sensing
MDS_1554
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pmk01004
]
MDS_1554
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pmk04147
]
MDS_1554
Enzymes [BR:
pmk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MDS_1554
Lipid biosynthesis proteins [BR:
pmk01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
MDS_1554
Exosome [BR:
pmk04147
]
Exosomal proteins
Exosomal proteins of breast milk
MDS_1554
Exosomal proteins of breast cancer cells
MDS_1554
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AEB57585
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Position
1694574..1696262
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AA seq
562 aa
AA seq
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MTENFWKDKYPVGVAAEINPDQYPNILAVLKESCQRFADKPAFSNLGKTLTYGEIYKLSG
DFAAYLQKHTNLKPGDRIAVQLPNVLQYPVVVFGAMRAGLVVVNTNPLYTAREMEHQFND
SGAKALICLANMAHLAEQVVPKTGVKTVIVTEVGDMLPTFKRLLVNFVIKHVKKMVPAYN
LPHAVKLNDALAKGRGQSFSEANPSNADIAVLQYTGGTTGVAKGAMLTHRNLVANMLQVK
ELMGANLNEGCEVLIAPLPLYHIYAFTFHCMAMMLIGGHNILLTNPRDLPSVIKDLAKYR
FTGFVGLNTLFVALCNNEDFRKLDFSSLKLTVSGGMALQLATAERWKEVTGCAICEGFGM
TETSPVATVNPFSAIQLGTIGIPVPSTLCRIINDDGQELAIGEIGELCVKGPQVMKGYWQ
RQEATDEILDADGWLKTGDIGLIQEDGYLRIVDRKKDMILVSGFNVYPNELEDVLATLPG
VLQCAAIGVPDEKSGEAIKVFVVVKPGESVTKEQVMEHMRANLTGYKVPKAVEFRDVLPT
TNVGKILRRELRDEELKKLGKK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaacttctggaaggacaagtatcccgttggggttgctgccgaaatcaatccc
gaccagtacccgaacatcctcgcggtactgaaggagtcctgccaacgcttcgccgacaag
cctgctttcagcaacctgggcaagaccctgacctacggcgagatctacaagctctccggt
gacttcgccgcctacctgcagaagcacaccaatctcaagcccggcgaccgcatcgccgtg
cagttgcccaacgtcctgcagtatcccgtcgtggtcttcggtgccatgcgcgccggccta
gtggtggtcaacaccaacccgctgtacaccgcacgggaaatggagcaccagttcaacgac
tccggcgccaaggcgctgatctgcctggccaacatggcccacctggccgagcaggtcgtg
cccaagaccggggtgaagacggtgatcgtcaccgaagtcggcgacatgctgccgaccttc
aagcgtctgctggtcaacttcgtgatcaagcacgtgaagaagatggtgccggcctacaac
ctgccgcacgccgtcaaactcaacgacgccctggccaagggccgcggccagagcttcagc
gaagccaacccgagcaacgccgatatcgccgtgctgcagtacaccggtggcaccaccggc
gtggccaagggcgcgatgcttacccatcgcaacctcgtggccaacatgctgcaggtcaag
gagctgatgggcgccaacctcaatgaaggttgcgaggtgctgatcgcgccgctgccgctc
tatcacatctacgccttcacctttcactgcatggcgatgatgctgatcggcggccacaac
atcctgctgaccaacccgcgcgatctgccgtcggtgatcaaggacctagccaagtaccgc
ttcaccggcttcgtcggcctcaataccctgttcgttgccctgtgcaacaacgaggacttc
cgcaagctggacttctccagcctgaagctcaccgtctccggcggcatggccctgcagctg
gccacggccgagcgctggaaggaagtcaccggttgcgccatctgcgaaggcttcggcatg
accgagaccagcccggtggccacggtcaacccgttcagcgccatccagctcggcaccatc
ggcattccggtgccatcgaccctgtgccgcatcatcaatgacgacggccaggagctggcc
atcggcgaaatcggcgagctgtgcgtgaaaggcccgcaggtgatgaagggctactggcag
cgccaggaagccaccgatgaaatcctcgatgccgatggctggctgaagaccggcgatatc
ggcctgatccaggaagacggctacctgcgtatcgtcgaccgcaagaaggacatgattctg
gtgtccggcttcaacgtctacccgaacgagctggaagacgtgctggcgaccctgccgggc
gtgctgcagtgcgctgccatcggtgtgccggacgagaaatccggcgaggcgatcaaggtg
ttcgtggtggtcaagccgggcgagagcgtgaccaaggagcaggtgatggagcacatgcgc
gccaatctcaccggctacaaggtgcccaaggctgtcgagttccgcgacgtgctgccgacc
accaacgtcggcaagatcctgcgccgcgaactgcgtgacgaagagctgaagaaactgggc
aagaagtga
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