Ectopseudomonas mendocina NK-01: MDS_1633
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Entry
MDS_1633 CDS
T01473
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk00071
Fatty acid degradation
pmk00280
Valine, leucine and isoleucine degradation
pmk00310
Lysine degradation
pmk00362
Benzoate degradation
pmk00380
Tryptophan metabolism
pmk00410
beta-Alanine metabolism
pmk00640
Propanoate metabolism
pmk00650
Butanoate metabolism
pmk00907
Pinene, camphor and geraniol degradation
pmk00930
Caprolactam degradation
pmk01100
Metabolic pathways
pmk01110
Biosynthesis of secondary metabolites
pmk01120
Microbial metabolism in diverse environments
pmk01200
Carbon metabolism
pmk01212
Fatty acid metabolism
Module
pmk_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
MDS_1633
00650 Butanoate metabolism
MDS_1633
09103 Lipid metabolism
00071 Fatty acid degradation
MDS_1633
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
MDS_1633
00310 Lysine degradation
MDS_1633
00380 Tryptophan metabolism
MDS_1633
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
MDS_1633
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
MDS_1633
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
MDS_1633
00930 Caprolactam degradation
MDS_1633
Enzymes [BR:
pmk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
MDS_1633
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
MDS_1633
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
MDS_1633
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
MDS_1633
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AEB57664
LinkDB
All DBs
Position
1780698..1782845
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLNELRASVDAIKADGSIKGVIVTS
GKDVFIVGADITEFVDNFKLPDEELVAGNLEANKIFSDFEDLAVPTVVAINGIALGGGFE
MCLAGDYRVMSETAKIGLPEVKLGIYPGFGGTVRLPRVIGTDNAVEWIASGKENRAEDAL
KVGAVDAVVAPAKLKDAALDLVKRAISGELDYKAKRQPKLEKLKLNAIEQMMCFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSVAESLIGLFLNDQEL
KKKAKHHDEIARDVKLAAVLGAGIMGGGIAYQSASKGTPILMKDIREEGIQMGLNEASKL
LGKRVEKGRMTPAKMAEALNAIRPTMSYGDFGNVDIVVEAVVENPKVKQIVLAEVEAVVR
EDAILASNTSTISISLLAQALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFSKLLGFGVDFVRIDKVMEKFGWPMGPAYL
SDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQKNGKGFYAYETDKRGKP
KKVSDPAAYELLKSIVVEEREVTDEDIINFMMIPLCLETVRCLEDGIVDTAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAEFVALADKYAELGALYHPTAKLREMAAKGQKFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgagagcggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaacaaattcaaccgtcttaccctcaacgagctg
cgcgcttccgtcgacgcgatcaaggctgacggttcgatcaagggcgtgattgtcaccagt
ggcaaggacgtgttcatcgtcggtgccgatatcaccgagttcgtcgacaacttcaaactg
cccgacgaagagctggtggctggcaacctggaagccaacaagatcttcagtgatttcgaa
gacctcgccgtgccgaccgtcgtcgccatcaacggcatcgccctgggtggcggcttcgag
atgtgcctggccggtgactaccgcgtaatgagcgagaccgccaagatcggtctgccggaa
gtcaagctgggcatctacccgggctttggcggtactgtgcgtctgccgcgtgtgatcggt
accgacaacgctgtcgagtggatcgcctccggtaaggaaaaccgcgcggaagacgcgctg
aaagtcggcgccgtcgatgcggtggtcgctcccgccaagctcaaggatgctgctctggat
ctggtcaagcgtgccatctccggcgagctggactacaaggccaaacgtcagcccaagctg
gaaaaactcaagctcaacgccatcgaacagatgatgtgcttcgagaccgccaagggcttc
gtcgccggtcaagccggtccgaactacccggcgccggtcgaggcgatcaagaccattcag
aaagctgccaacttcggccgcgacaaggcgctggaagtcgaggctgccggcttcgtcaag
ctggccaagacttcggttgccgagagcctgatcggcctgttcctgaacgatcaggaactg
aagaagaaggccaagcaccacgacgaaatcgctcgtgacgtgaaactggctgccgtactc
ggcgccggcatcatgggcggtggtatcgcctaccagtcggcctccaagggcacgccgatc
ctgatgaaggatatccgtgaagagggtatccagatgggcttgaacgaggcctccaagctg
ctcggcaagcgcgtcgagaagggtcgcatgaccccggcgaagatggccgaagccctcaac
gccatccgtccgaccatgtcctatggtgatttcggcaacgtcgacatcgtcgtcgaagcc
gtggtcgagaaccccaaggtcaagcagatcgtgctggccgaggtggaagctgtggtgcgt
gaagatgccatcctggcctccaatacctcgaccatctccatttccctgctggcccaggcg
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtcatccgtggcgagaaatccagcgaagtggccgtggccaccaccgtggcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgccccggcttcctggtc
aaccgtgtgctgttcccgtacttcggcggcttctccaagctgctgggtttcggcgtcgac
ttcgtgcgcatcgacaaggtgatggagaagttcggctggcccatgggcccggcttatctc
tccgacgtggttggcatcgacaccggccaccatggccgtgacgtgatggccgagggcttc
ccggatcgtatggccgtagaaggcaagactgccgtcgacgtgatgtacgaggccaaccgc
ctgggccagaagaatggcaagggcttctacgcctacgagaccgacaagcgcggcaagccg
aagaaggtctccgacccggctgcttacgagctgctcaagtccatcgtggtcgaagagcgt
gaagtcaccgacgaggacatcatcaacttcatgatgattccgctgtgcctggaaactgtt
cgttgcctggaagacggcatcgtcgataccgcagccgaggccgacatgggcctgatctac
ggtatcggcttccctcccttccgtggcggtgcgctgcgctatatcgattccatcggtgta
gctgaattcgtcgccctggctgacaaatatgccgagctgggcgccctgtaccacccgacc
gcaaaacttcgtgaaatggccgccaagggccagaagttcttcggttaa
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