Ectopseudomonas mendocina NK-01: MDS_1847
Help
Entry
MDS_1847 CDS
T01473
Name
(GenBank) two component, sigma54 specific, fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk02020
Two-component system
pmk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MDS_1847
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MDS_1847
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pmk02022
]
MDS_1847
02035 Bacterial motility proteins [BR:
pmk02035
]
MDS_1847
Two-component system [BR:
pmk02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
MDS_1847
Bacterial motility proteins [BR:
pmk02035
]
Flagellar system
Flagellar assembly proteins
Others
MDS_1847
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
MCM
HTH_20
HTH_30
MerR
Mg_chelatase
AAA_3
AAA_2
FleQ
AAA
HTH_24
HTH_23
AAA_19
HTH_11
AAA_22
HTH_28
AAA_7
nSTAND3
Sigma70_r4_2
RsiG
HTH_17
HTH_1
HTH_Mga
Myosin_head
Motif
Other DBs
NCBI-ProteinID:
AEB57878
LinkDB
All DBs
Position
2031468..2032883
Genome browser
AA seq
471 aa
AA seq
DB search
MAAKVLLVEDDRALREALADTLCLGGHDYRAVDCAEAALVALTEEPFGLVVSDVNMPGMD
GHQLLAQIRDRYPQLPVLLMTAFGAVERAVDAIRQGAADYLVKPFEPRTLLELVARHALG
KLTAGDRDGPVALEPASVQLLELASRVAQSDSTVMITGESGTGKEVLARYIHQQSPRATG
PFIAINCAAIPDNMLEATLFGHEKGAFTGAVNAQPGKFELADGGTILLDEISEMPLGLQA
KLLRVLQEREVERVGARKPINLDIRVLATSNRDLASEVAAGRFREDLYYRLSVFPLAWRP
LRERPADILPLAERLLAKHVKKMNQAPVRLSESAAQSLVQHQWPGNVRELDNAIQRALIL
QQGGVIQAQDLCLHAPIGQTVQIAAPRLAVVPSVAPLLPQPGEATGAADSSALGEDLRRR
EFQVIIDTLRAERGRRKEAAERLGISPRTLRYKLAQMRDAGMDVEAYLYAS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaagtcctgttggttgaagacgatcgcgccctgcgcgaagccctggccgat
accctgtgcctgggcgggcatgattatcgtgcggtcgattgtgccgaggcggctctggtc
gccttgaccgaggaaccgtttgggctggtggtcagcgatgtcaacatgccgggtatggat
ggacaccaactgctggcgcagattcgcgatcgctatccgcaattgccggtgttgctgatg
acagccttcggtgccgtggagcgtgcggtggatgccattcgtcagggggcggccgattat
ctcgtcaagcctttcgagccacgcacgctgctggaactcgttgccaggcatgcgctcgga
aaattgacggcgggtgatcgtgatgggccggtcgcgctcgaacccgccagcgtgcagctg
ctggagctggcatcccgcgtggcgcagagcgattcgacggtgatgattaccggtgagtcc
ggtaccggcaaggaggtattggcacgctatatccatcagcagtcgccacgtgcaactggg
ccattcatcgccatcaactgcgcggcaattcccgacaacatgctcgaggccacgttgttc
ggtcatgagaagggggcgtttacgggggcggtcaacgcgcagccgggcaagttcgagtta
gccgatggcggcaccattttgctcgacgaaatttccgaaatgccgctgggcttgcaggcc
aagttgctgcgtgtgttgcaggagcgtgaggtggagcgggtcggagcgcgcaagccgatc
aatctggatattcgcgtgctggccaccagcaaccgtgaccttgccagcgaagtcgcagcg
ggacggtttcgtgaggatctctactatcgcctgtcggttttcccactggcctggcgaccg
ctgcgtgaacgacctgccgatatcctgccgctagctgagcggctgctggccaaacacgtc
aaaaaaatgaatcaggcaccggtgcgtctgtccgagtctgctgcgcaaagcctggtgcag
catcagtggccgggtaacgtgcgcgagttggataatgccatccagcgcgcattgatcctg
cagcagggcggggtgatccaggcgcaggatctctgcctgcacgcgccgatcggccaaacg
gtacagattgccgcgccgcgtctggcggtcgtgccgagcgtcgcgccacttttgccgcag
ccgggggaagcgaccggtgcggcggattccagcgccctgggtgaggatcttcgccgtcgc
gagttccaggtgatcatcgataccttgcgcgctgagcgcggccgtcgcaaggaggcggcc
gagagactgggcatcagcccccgtacgctgcgctacaagctggctcagatgcgcgatgcc
ggtatggatgtcgaggcttatctgtacgccagttaa
DBGET
integrated database retrieval system
