Ectopseudomonas mendocina NK-01: MDS_1869
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Entry
MDS_1869 CDS
T01473
Name
(GenBank) flagellar biosynthesis sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk02020
Two-component system
pmk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MDS_1869
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MDS_1869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmk03021
]
MDS_1869
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pmk02035
]
MDS_1869
Transcription machinery [BR:
pmk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MDS_1869
Bacterial motility proteins [BR:
pmk02035
]
Flagellar system
Flagellar assembly proteins
Stator
MDS_1869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
HTH_30
MarR_2
GerE
Rv2175c_wHTH
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
AEB57900
LinkDB
All DBs
Position
2052879..2053601
Genome browser
AA seq
240 aa
AA seq
DB search
MYNKAQAQDSQHQLIERYAPLVKRIAYHLLARLPASVQVDDLIQAGMIGLLEASRKYDSG
KGASFETFAGIRIRGSMLDEVRKGDWAPRSVHRNSRMVSDAIRTVEARTGRDAKDHEVAA
ELQLSLEDYYGILGDTLGSRLFSFDDLLQDGEHGGLHEDAGHTHLEPSRDLEDERFQAAL
ADAIAGLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRSRLSEWRAG
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacaaggctcaggcgcaggactcccagcaccagctgatcgagcgttatgcaccg
ctggtcaagcgtatcgcctaccacctgctggcgcgcctgccagccagtgtgcaggtcgat
gatctcatccaggccggcatgatcggcctgctcgaagcctcacgcaaatacgactccggc
aaaggcgcgagtttcgaaacattcgcaggtattcgtatccgcggctccatgctcgatgag
gtgcgcaagggcgattgggcgccgcgttcggtgcatcgcaacagccgcatggtgagcgat
gcgattcgcaccgttgaagcgagaaccgggcgcgacgctaaagatcatgaggttgcggcc
gaactccaattgagtctggaagattactacggcattcttggcgacactttgggtagccgg
ctgttcagtttcgacgacctcttgcaggacggcgagcatggcgggctgcacgaagacgcc
gggcacacccacctcgaaccttcgcgggacctcgaagacgaacgcttccaggcggctttg
gccgatgccatcgccggcttgccggagcgtgaacgtctagtgttggcgctgtattacgat
gaagaactgaacttgaaggaaatcggtgaagtgctgggggttagcgagtcgcgcgtgagc
cagttgcacagccagtgcgcggcgcgtttgcgctcgcggctgagtgaatggcgcgctggc
tga
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integrated database retrieval system
