Ectopseudomonas mendocina NK-01: MDS_1890
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Entry
MDS_1890 CDS
T01473
Name
(GenBank) TPR repeat-containing protein
KO
K02200
cytochrome c-type biogenesis protein CcmH
Organism
pmk
Ectopseudomonas mendocina NK-01
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
MDS_1890
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_CycH
TPR_CcmH_CycH
TPR_16
TPR_2
TPR_19
TPR_14
TPR_1
TPR_12
TPR_8
TPR_7
TPR_9
SH3BP5
EAD11
ARM_TT21_C
HEAT_Nup120
ARM_TT21_N
Asd-4
Motif
Other DBs
NCBI-ProteinID:
AEB57921
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Position
2070621..2071832
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AA seq
403 aa
AA seq
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MIDFWLPAGLLLLTALAFLLIPVLRIRKLQAEEDRTALNVTLYQERLQELEAQRQAGVLD
DAQMQAGRAEAARELLDDTEGVQRRSGVLGGKIPLVSALLVPVLGVALYLHWGALDQVEQ
TRQLAAMQPQSIEEMTARLEQTVKQQPDSAEGWYFLGRTYMAQERAGDAAKAFERAVEIA
GRAPELLGQWAQALYFAEGKQWNEQLQGLTDEALKADPEEVTSLGLLGIAAYESQRYADA
VRYWERLVTVLPEQDPSRAAIAGGIERARQQMGEGEQSSAAAEPSAKVHALEVSVSLSPE
VQQNVQPDDAVFVFARALSGPPMPLAAKRLKVSDLPVQISLSDVDAMMPELKISQFEQVQ
LVARVSRAGNATQGEWTGQTGPVASTARGVQTLLIDRRDGQAQ
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatttctggttgcccgccgggctgcttttgctgactgccctggcgtttctgctg
attccggtactgcgcattcgcaagctgcaggccgaagaagaccgtaccgcactcaacgtc
accctctatcaggaacgcctgcaggagctggaagcccagcgccaggccggtgtgctcgat
gatgcgcagatgcaggccggtcgtgccgaagcggcgcgcgagctgctcgacgataccgaa
ggcgtgcagcgccgcagcggtgtgctcggcggcaagatcccgctggtctcggcgttgctg
gtgccggtgctcggcgtggccctgtacctgcactggggcgcgctcgatcaggtggagcag
acacgtcagctggcggccatgcagccgcagagcatcgaggaaatgaccgcgcgcctggag
cagaccgtcaagcagcagccggactccgccgaaggctggtacttccttggccgtacctat
atggcgcaggagcgtgccggcgatgccgccaaggccttcgagcgcgccgtggagatcgcc
gggcgcgccccggaactgctcggtcaatgggcgcaggcgttgtatttcgccgaaggcaaa
cagtggaacgaacaattgcaggggctcaccgacgaggcgttgaaggccgatccggaagag
gtcaccagcctgggcctgctgggcatcgccgcctatgaaagtcagcgctatgctgatgca
gtgcgctactgggagcgtctggtcaccgtgctgccggagcaggacccgtcccgcgcggcc
atcgccggcggtatcgagcgcgcccggcagcagatgggcgagggcgagcagagcagtgct
gccgccgagccgagcgccaaggtgcatgccctggaagtcagcgtgtcattgtcgcccgag
gtgcagcagaacgttcagccggacgatgccgtgttcgtcttcgcccgtgcactcagcggc
ccgccgatgcctctggcggccaagcgcctgaaggtctccgacctaccggtgcagatcagt
ctctcggatgtggatgcgatgatgccggaactgaaaatttcgcaattcgagcaggtgcaa
ttggtggcgcgggtctcccgcgctggcaatgctacccagggtgagtggacgggccagacc
ggcccggtggccagtaccgcccgcggcgtacagacgctgttgatcgaccgccgcgacggg
caggcacagtga
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