Pseudomonas mendocina NK-01: MDS_1930
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Entry
MDS_1930 CDS
T01473
Name
(GenBank) condensin subunit Smc
KO
K03529
chromosome segregation protein
Organism
pmk
Pseudomonas mendocina NK-01
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmk03036
]
MDS_1930
Chromosome and associated proteins [BR:
pmk03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
MDS_1930
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
SMC_hinge
AAA_29
DUF4763
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AEB57961
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Position
2114934..2118422
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AA seq
1162 aa
AA seq
DB search
MRLKSIKLAGFKSFVDPTTVSFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES
MTDVIFNGSNTRKPVTQASIELIFDNSDNSLVGEYAAFAEISIRRRVTRDGQNTYFLNGT
KCRRRDITDIFLGTGLGPRSYSIIEQGMISKLIEAKPEELRNFIEEAAGISKYKERRRET
ENRIRRTQENLARLTDLREELERQLERLHRQAQAAEKYQEYKAEERQLKAQLLALRWQGL
NQQVGSREQVIGDQEVAFEALVAEQRSADAAIERLRDGHHELSERFNLVQGRFYSVGGDI
ARVEQSIQHGQQRLRQLQDDLREAEKARLETESHLGHDRTLLATLGEELEMLLPEQEMTA
AAAEESAASLEEAEAAMHGWQEQWDGFNQRSAEPRRQAEVQQSRIAQLEQSLERLAERQR
RLNEELQQLAADPEDAAILELNEQLAAGELEHEALQLAEEQQAERLQQLREELQQAGQAQ
QQVQGELQRLNGRLASLEALQQAALDPGQGAGEWLREQNLQQRPRLAEGLRVESGWELAV
ETVLGADLQAVLLDDFAGLDFSALEQGELRLASPASGGARRAGSLLDKVESSHDLSPWLA
GVRPVESLEQALAARGQLADGESLISRDGYWVGRHFLRVRRAAEADNGVLARGQELERLQ
LEREEREAALAQLDERLLALRDDQRLQEEQREQQRRQGQELARQLSELKAKLSASQAKAE
QLGLRRRRLQDELQEAAEQREVEQEQLGESRLQLQDALDAMALDNEQRESLLASRDSLRE
RLDRVRQEARQHKDHAHQLAVRVGSLKAQHDSTRQALERLEMQAERLHERREQLSLNLEE
GEAPLEELRIKLEELLERRMAVDDELRQARLALEDADRELRDAEKRRTQAEQQAQLLRSQ
LEQQRMDWQSLNVRRKALADQLAEDNYDLHGVIATLPAEATESAWEEELERMAARIARLG
PINLAAIDEYQQQSERKRYLDAQDADLVEALETLENVIRKIDKETRNRFKDTFDQINGGL
QALFPKVFGGGNAYLELTGEDLLDTGVTIMARPPGKKNSTIHLLSGGEKALTALALVFSI
FQLNPAPFCMLDEVDAPLDDANVGRYARLVKEMSATVQFIYITHNKIAMEMADQLMGVTM
HEPGCSRLVAVDVEEALAMVEA
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgaaaagcatcaagctggcgggcttcaagtccttcgtcgatccgacgacggtg
agcttccccagcaacatggcggcggtggtcgggcccaatggttgcggcaagtcgaacatc
atcgacgccgtgcgctgggtgatgggcgaaagctcggcgaagaacctgcgcggcgagtcg
atgaccgacgtcatcttcaacggttccaacacgcgcaagccggtgacccaggcctccatc
gaactgatcttcgacaacagcgacaactcgctggtgggcgagtacgccgctttcgcggaa
atttccatccgccgccgggtcacccgcgacgggcagaacacctatttcctcaacggcacc
aagtgccgtcgccgcgatatcactgacatcttcctaggcaccggcctgggcccgcgcagc
tactcgatcatcgagcagggcatgatcagcaagctgatcgaggccaagcccgaggagctg
cgcaacttcatcgaagaggccgccggcatctccaagtacaaggagcgccgccgcgagacc
gagaaccgcatccgccgcacccaggaaaacctggcgcgcctgaccgatctgcgcgaggaa
ctggagcgccagctcgaacgcctgcaccgtcaggcccaggcagcggagaaataccaggaa
tacaaggccgaagaacgccagctcaaggcgcaactgctggcactgcgctggcaggggctg
aaccagcaggtgggcagccgcgagcaggtgatcggtgaccaggaggtggccttcgaggcg
ctggtggccgaacagcgtagcgccgatgccgccatcgagcgtctgcgcgacggccatcac
gaactctccgagcgtttcaacctggtgcagggccgcttctattccgtgggtggcgacatc
gcccgcgtcgagcagagcatccagcatggccaacagcgcctgcgtcagttgcaggacgat
ttgcgcgaggcggaaaaggcgcgcctggaaaccgaatcgcacctggggcacgaccgcact
ttgctggctactctgggcgaagagctggagatgctcctgcccgagcaggagatgactgcg
gctgccgccgaagaatccgcagccagcctggaagaggccgaggccgccatgcatggctgg
caggagcagtgggacggcttcaaccagcgcagcgccgaaccgcgccgccaggccgaggtg
caacagtcgcgcatcgcccagctggagcagagcctggagcgcctggccgaacgccagcgc
cgtctgaatgaagaattgcagcaactggctgccgacccagaagacgccgccattctcgaa
ttgaatgaacagcttgccgctggcgagctggagcacgaagcgctgcaactggccgaggag
cagcaggccgagcgcctgcagcaactgcgcgaagagctgcagcaagccggtcaggcccag
cagcaggtgcaaggtgagctgcaacgcctcaatggtcgcctggcatcgctggaagcgctg
caacaggctgcgctcgatccagggcagggtgccggcgagtggctgcgcgagcagaacctg
caacagcgtccgcgcctggccgaagggctgcgcgtcgagtccggctgggagctggcggtg
gaaacagtgctcggtgccgacctgcaggccgtgctgctggatgatttcgccggcctggat
ttctctgcgctggagcagggcgagctgcgtctggccagccccgccagtggtggtgcgcgc
cgcgccggcagcctgctggacaaggtggagtcgagccatgacctgtcgccctggctggcc
ggggtgcgcccggtcgaatcactggagcaggcactggcggctcgtgggcaattggcggac
ggcgaaagcctgatcagtcgtgacggctactgggtcggccggcacttcctgcgtgtgcgc
cgcgctgccgaggcggacaacggcgtgctggcgcgcggtcaggaactcgagcgtttgcag
ctggagcgcgaagagcgtgaagcggccctggcgcaactggatgaacgcctgctggcgttg
cgcgatgatcaacgtcttcaggaggagcagcgtgagcagcagcgtcgccaaggccaggag
ctggcgcggcaactgagtgagctgaaagcaaagctgtccgccagccaggccaaggccgag
caactgggtctgcgccgtcgccgtctgcaggatgaactgcaggaagcggccgagcaacgt
gaggtcgagcaggaacaactgggtgagtcgcgcttgcaactgcaggatgcgctggacgcc
atggcgctggataacgagcagcgcgaaagcctgctggccagccgtgacagcctgcgcgag
cgcctcgatcgtgtgcgtcaggaggcccgccaacacaaggatcacgcgcaccagttggcg
gtgcgcgtcggctcgctcaaggcgcagcacgactccacccgtcaggcgctggagcgtctg
gagatgcaggccgagcgcctgcatgagcggcgcgagcaactatcgctgaacctggaggag
ggtgaggcgccgctggaagagttgcgcatcaagcttgaagaactgctcgaacggcgtatg
gcggtggacgatgaactgcgtcaggcacgcctggcgctggaagacgccgaccgcgaactg
cgtgatgccgagaagcgccgcacccaggccgaacaacaggcgcaattgctgcgcagccag
ttggagcagcagcgcatggactggcagtcgctcaacgtgcggcgcaaggccttggccgac
cagctcgccgaggacaactacgacctgcacggggtgatcgccacgctgccggctgaggct
acggaaagcgcctgggaagaagagctggagcgcatggccgcgcgtattgcccgtctcggg
ccgatcaacctggcggctatcgacgagtatcagcagcagtccgagcgtaagcgctacctg
gatgctcaggacgccgacctggtcgaggcgctggaaaccctggagaacgtcatccgcaag
atcgacaaggaaacacgcaatcgtttcaaggacaccttcgatcagatcaacggcggtttg
caggcactctttccaaaagttttcggtggcggcaacgcttatttggaactcaccggcgaa
gatttactcgataccggtgtaaccatcatggcgcggcccccgggtaagaagaacagcacc
attcatttgctctccggtggagagaaggcgttgaccgccttggcattggtgttttccatc
ttccagctcaatccggcgccgttttgcatgttggacgaagtggacgcaccgctggacgat
gccaacgtcgggcgctatgcgcgactggtcaaggagatgtcggcgacggtgcagttcatc
tatatcacccacaacaagatcgccatggaaatggccgatcaactgatgggggtcaccatg
cacgagccgggctgctcgcgtctggtggcagtggatgtcgaggaggcgttggcgatggtg
gaggcgtga
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integrated database retrieval system
