Ectopseudomonas mendocina NK-01: MDS_1946
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Entry
MDS_1946 CDS
T01473
Name
(GenBank) alcohol dehydrogenase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MDS_1946
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmk03400
]
MDS_1946
Enzymes [BR:
pmk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
MDS_1946
DNA repair and recombination proteins [BR:
pmk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MDS_1946
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AEB57977
LinkDB
All DBs
Position
complement(2131844..2132722)
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AA seq
292 aa
AA seq
DB search
MNIITLLLPYQPPWDWQQFHGHFALRAVPGLESLSADSYSRGFSIDGAPGWLRVAPLPGQ
NALELRCRIASPAHLDQLEQRVRRMFDLDSEPDAIARHLSTDELLAPLLQRNPGLRLPVA
FDPFEQAVRAIVGQQVTVKAAVTIVGRLVHRVGTPIETPEALGISRLFPTPQALADADLT
GIGMPGKRVQCLQHFAASIADGSLQLSLRDGSAALIEQLCSLPGIGPWTAEYIALRAFGE
ADAFPASDLGLLKAPVWGTQGIDARRLKDRAEAWRPWRAYAAAHLWHNYSGG
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcatcacgctgcttctaccctatcaaccaccgtgggactggcaacagttccat
ggccacttcgccctacgtgcggtcccgggactcgagtcactgagcgcagacagctacagc
cgcggcttcagcatcgacggtgcgccaggctggctacgcgtggcaccgttgcccgggcag
aacgccctggaactgcgctgccgcatcgcgtcgccagcgcatctcgatcaactggagcag
cgcgtgcggcgcatgttcgatctcgatagcgagccagacgcgattgcccgccacctaagc
accgacgagctgctcgcaccgctgctgcagcgcaacccaggcctgcgattgccagtagcg
ttcgatccgttcgagcaggcggtacgtgccatcgtcggccaacaggtcacggtcaaggct
gcggtgaccatagtcgggcgcctggtgcaccgtgtcggcacgccgatcgagacgccggaa
gcgctgggcatcagccgtctgtttccgacgccgcaggcgcttgccgacgcagatctgact
ggcatcggcatgcccggcaagcgcgtgcagtgcctgcagcatttcgctgcaagtattgct
gacggcagcctgcaactgagcctgcgcgacggcagcgcggcgttgatcgagcaactttgc
tccctgcccggcatcggcccgtggacagcggagtacatcgccctgcgtgcattcggtgaa
gccgatgcctttcccgccagcgacctgggtctgctcaaggcgcccgtgtggggaacgcaa
gggatcgatgcgcgccgcctgaaagaccgcgccgaagcctggcgcccgtggcgcgcctat
gcggcggcgcatctctggcataactactcgggaggctga
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