Ectopseudomonas mendocina NK-01: MDS_1979
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Entry
MDS_1979 CDS
T01473
Name
(GenBank) nucleotide sugar epimerase/dehydratase WbpM
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk00541
Biosynthesis of various nucleotide sugars
pmk00552
Teichoic acid biosynthesis
pmk01100
Metabolic pathways
pmk01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
MDS_1979
00552 Teichoic acid biosynthesis
MDS_1979
Enzymes [BR:
pmk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
MDS_1979
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Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
adh_short
NAD_binding_4
KR
NAD_binding_10
CoA_binding_3
wHTH_TTC3
Motif
Other DBs
NCBI-ProteinID:
AEB58010
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Position
2179233..2180672
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AA seq
479 aa
AA seq
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MQPVAFVDDDDNIATRIIAGLQVYKPKHIQQMVEETGAQEILLAVPSLSRARRREILECL
EGFPLHVRSVPGFMDLASGRVKVDDLQEVDIADLLGRDPVPPNQALLDRCIKGQVVMVTG
AGGSIGSELCRQILASAPRVLVLFDHSEYNLYSIHTELEQRIQREYLPVQLIPILGSVRN
AARLLDVMQTWHVNTVYHAAAYKHVPMVEHNIAEGVLNNVVGTLNAAQSAIQAGVEHFVL
ISTDKAVRPTNVMGSSKRLAEMILQALSDESAPVLFGEDGVHRVNKTRFNMVRFGNVLGS
SGSVIPRFHEQIRRGGPLTVTHPNITRYFMTIPEAAQLVIQAGSLGQGGDVFVLDMGPPV
KILDLAEKMIHLSGLSVRSERNPHGDISIEFTGLRPGEKLYEELLIGNDVSQTQHPMIMR
ANEEMLSWDVYKRVLRELLGALESDDYDRVRQLLRETVSGYRPEGDIVDWIHMRQRSDS
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcagccggtggcgttcgtcgatgatgacgacaatatcgctacccgaatcatcgccggt
ctgcaggtctacaagcctaaacatatccagcagatggtagaggagaccggggctcaggag
attttgctggcggtgccttcgctgtcacgggcgcggcgccgtgaaattcttgaatgcctc
gaaggttttccgttgcatgtccgttctgtgccgggcttcatggatcttgctagcgggcgg
gtgaaggtcgacgacctgcaggaggtcgatattgccgacttgctggggcgagacccagta
ccgccaaaccaggcattgctggaccgctgcatcaaaggtcaggtggtaatggtcaccggt
gcgggcggctctatcgggtccgagttgtgtaggcagattcttgcaagtgctccaagggtg
ctggtgctgttcgatcactcggaatataacctctacagcattcataccgagttggagcag
cgcattcagcgcgagtatctgcctgtgcagctgattcccattttggggtccgtacgtaat
gcagcccggctgctggatgtcatgcagacttggcatgttaatactgtgtaccacgccgcg
gcctacaaacatgtgcccatggttgagcacaacattgccgagggcgtacttaacaatgtg
gtggggacattaaacgctgctcagtctgccatccaggcaggtgttgagcatttcgtgttg
atctctactgacaaggcggttcgccccactaacgtgatgggtagtagcaagcgccttgcc
gagatgattctacaggcgttgagtgatgagtcggcccccgttctatttggtgaggatggt
gttcatcgcgtcaataaaacgcgtttcaatatggtgcgcttcggtaacgtgctgggatcg
tctggctcggtaattccgagatttcacgagcagattcggcgcggtgggccgcttaccgtc
acccaccccaacattactcgctacttcatgactatcccggaagcagcgcaattggtgatt
caggctggatcgttaggccagggcggcgatgtgttcgttctagatatggggccgccagtc
aagatcctcgatttggccgagaagatgatccatttgagtggcctgagtgtgcgttctgag
cgcaatccacatggtgatatctcaatagagttcaccgggttgcggccaggcgaaaagttg
tatgaggaactgttgatcggtaatgacgtcagtcagacgcagcaccccatgatcatgcga
gccaatgaagaaatgctctcttgggatgtctacaagcgtgtcttgagggagctgctcggg
gcgttggaaagtgatgattatgaccgagtgcgacagttgcttcgcgagacggtcagtggc
tatcgcccggagggggacattgtcgactggattcatatgcggcaacgttcagatagctga
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