Ectopseudomonas mendocina NK-01: MDS_2054
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Entry
MDS_2054 CDS
T01473
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pmk
Ectopseudomonas mendocina NK-01
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmk03032
]
MDS_2054
03036 Chromosome and associated proteins [BR:
pmk03036
]
MDS_2054
03400 DNA repair and recombination proteins [BR:
pmk03400
]
MDS_2054
DNA replication proteins [BR:
pmk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MDS_2054
Chromosome and associated proteins [BR:
pmk03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MDS_2054
DNA repair and recombination proteins [BR:
pmk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MDS_2054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Poly_export
HTH_IclR
SSPI
Motif
Other DBs
NCBI-ProteinID:
AEB58085
LinkDB
All DBs
Position
complement(2264795..2265073)
Genome browser
AA seq
92 aa
AA seq
DB search
MAITKDQLISDLAEAVSLPKATVRTLIDQLGEIVGDALENDGEITLPGIGKLKVSERPAR
TGRNPQTGKSIEIAAKKVVKLVPAKALTDALN
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcaccaaagaccaactgatcagcgacctggccgaggccgtatccctgccgaaa
gccactgtccgcaccctgatcgatcagttgggcgaaattgtcggcgacgcgctggaaaac
gatggtgagatcaccctgccgggtatcggcaaactgaaagtgagcgagcgcccggcccgt
actggccgtaacccgcagacgggcaagagcatcgaaatcgctgccaagaaagtggtcaag
ctggtgccggccaaggccctgactgacgcactgaactga
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integrated database retrieval system
