Ectopseudomonas mendocina NK-01: MDS_2063
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Entry
MDS_2063 CDS
T01473
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk03030
DNA replication
pmk03430
Mismatch repair
pmk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MDS_2063
03430 Mismatch repair
MDS_2063
03440 Homologous recombination
MDS_2063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmk03032
]
MDS_2063
03400 DNA repair and recombination proteins [BR:
pmk03400
]
MDS_2063
Enzymes [BR:
pmk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MDS_2063
DNA replication proteins [BR:
pmk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MDS_2063
DNA repair and recombination proteins [BR:
pmk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MDS_2063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
ResIII
AAA_14
AAA_30
AAA_19
AAA_18
AAA_16
AAA_2
TsaE
DUF3646
PIF1
nSTAND3
AAA_7
Rad17
SKI
zf-CXXC
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
AEB58094
LinkDB
All DBs
Position
2278728..2280860
Genome browser
AA seq
710 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGISSTPCGTCSVCREIDEGRFVDLIEVDAASRTKVEDTRELLDNVQYSPSRGRF
KVYLIDEVHMLSTSSFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLQFSLKNMPP
ERVVEHLTHVLTAENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVLAADVRAM
LGTLDHGQVYGVLHALIEGDARALIEAVRHLAEQGPDWNGVLAEMLNVLHRVAIAQALPD
AVDNGQGDRERVLQLAQALPAEDVQFYYQMALIGRRDLPLAPEPRGGFEMVLLRMLAFRP
AGADDAPKVTLKPLGISQATADSQQNPVAGTAMPAPVVSAPVAPAVLAPAVAIPAEPSPA
AVVATVSPVVQEEPVPAVETPAAPAANLSPEPEPEPEPEPEPEPEPEPEPEPEPEPAAPE
SRAAVDVPWETAKVLEPAAVPAQSAVVAEPVAAAADVVAAPATNEIVQPVTDTDGGDDEP
PPGDYDYVEMDAETLDYDFGQAESAMPVVEEPLPAAKPATGLAAEWLSLFPQLGLGGMTG
SIAANCTLVEANGDDWLLHLDPAHSALFNPTQQRRLNDALNQQQGRSIKLRIELCKPEQE
TPAQAAARRRAERQRSAEASIQADPLVQQMIQQFAAKVRDDSIEPIDTPS
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
cagacccatgtgctcaaagccctgatcaacgccctcgacagtcagcgtctgcaccatgcc
tacctgtttaccggcacccgtggcgtaggcaagaccaccattgcgcggatcatcgccaag
tgcctgaactgcgaaaccggcatcagctccacgccctgcggtacctgctcggtttgtcgg
gaaatcgatgagggacgcttcgtcgacctgatcgaagtggatgccgccagccgcaccaag
gtcgaagacacccgcgaactgctcgacaatgtgcagtactcgccaagtcgcggccgcttc
aaggtctacctgatcgacgaagtgcacatgctctccaccagctcctttaacgcgctgttg
aagaccctggaagagccgcccccccacgtgaagttcctgctcgccaccaccgatccgcag
aagttgccggtcaccgtgctgtcgcgctgcctgcagttctcgctgaagaacatgccgccg
gagcgcgtggtcgagcacctgactcatgttctgaccgccgagaacgtaccgttcgaagac
gatgcgctgtggctgcttggccgtgctgccgacggctcgatgcgcgacgccatgagcctc
accgaccaggccatcgcctttggcgagggcaaagtgctggctgccgatgtgcgtgcgatg
ctcggcacactggatcacggccaggtctacggtgtgctgcatgcactgatcgaaggtgac
gcgcgggcgcttatcgaggcggtgcgtcatctggccgaacaagggccggactggaacggc
gtgctggcggaaatgctcaacgtgctgcaccgcgtggccatcgcccaggcattgccggat
gccgtggataacggccagggcgatcgcgagcgcgtgctgcagttggctcaggcgctgccg
gcagaagacgtgcagttctattatcagatggccctgatcggtcgtcgcgacctgccgctt
gcacctgagccgcgcggtggcttcgagatggtgctgctgcggatgctggctttccgccca
gcgggcgctgatgacgcgccaaaggtcacgctaaagcccttggggatcagccaggccact
gctgattcccaacagaacccagtggccggcaccgctatgccggctccagtggtttctgct
ccagtcgctcccgccgtactggcgcccgctgttgcgattcctgccgagcccagcccggcc
gccgtggttgcgaccgtatcgcctgtcgtgcaagaagagccagtcccagcggttgaaacg
cctgcagcgccagctgccaatctgtcgccagagccagagccagagccagagccagagcca
gagccagagccagagccagagccagagccagagccagagccagagccagctgcccctgag
tcgcgggctgcagtcgacgtgccttgggaaacggccaaggtccttgagccggctgccgta
cccgctcagtccgctgttgtcgctgagcctgtagcggccgcagctgatgtggttgcggcg
cccgcaacgaacgagatcgtgcagcccgtaacggacaccgatggcggtgacgatgaaccg
ccacccggcgactacgactacgtggaaatggacgccgaaacgctcgactacgatttcggc
caggccgaatccgcgatgcccgtggtcgaagagccgttgccggccgccaagccggctacc
gggctggcggcagagtggctgtcactgttcccgcagcttggactgggcggcatgactggc
agcatcgccgccaactgcaccctggtcgaagccaatggtgatgactggctgctgcacctg
gacccggcgcacagcgcactgttcaacccgacgcagcagcgtcgtctgaacgacgcgctg
aaccagcagcagggccgcagcatcaaactgcgcatcgagctgtgcaagcccgagcaggaa
accccggcccaggcggctgcgcgtcgtcgtgccgagcgccagcgtagcgccgaggcttcg
atccaggccgacccgctggtgcagcagatgattcagcagttcgccgccaaggtgcgcgac
gacagcatcgagcctatcgatacacctagctag
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