Ectopseudomonas mendocina NK-01: MDS_2221
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Entry
MDS_2221 CDS
T01473
Name
(GenBank) lysine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk00330
Arginine and proline metabolism
pmk01100
Metabolic pathways
pmk01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
MDS_2221
Enzymes [BR:
pmk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
MDS_2221
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AEB58252
LinkDB
All DBs
Position
2429691..2431934
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AA seq
747 aa
AA seq
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MYKDLKFPVLIVHRDIKADTVAGDRVRAIAQELTQDGFSILPTANAAEGRIVASTHHGLA
CILVAAEGAGENSRLLQDMVELIRVARVRAPQLPIFALGEQVTIENAPAEAMADLNHLRG
ILYLYEDTVSFLARQVARAAHNYLDGLLPPFFKALVQHTAQSNYSWHTPGHGGGVAYRKS
PVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAEAEARAARNFGADHTFFVINGTS
TANKIVWHSMVGRDDLVLVDRNCHKSILHSIIMTGAIPLYLCPERNELGIIGPIPLSEFS
RESIQAKIEASPLARGRAPKVKLAVVTNSTYDGLCYNAEMVKQALGDSVEVLHFDEAWYA
YAAFHEFYAGRYGMGTQCDEQSPLVFTTHSTHKLLAAFSQASMIHVQDGGQRQLDRDRFN
EAFMMHISTSPQYGIIASLDVASAMMEGPAGRSLIQETFDEALSFRRALANVRRNLSAED
WWFSIWQPGAADGADSLSTADWVLQPDADWHGFGEVASDYVLLDPIKVTLVMPGLNAAGK
LEQQGIPAAVVSKFLWERGLVVEKTGLYSFLVLFSMGITKGKWSTLLTELLEFKRSYDAN
LPLIDVLPSIAHAGGGRYQGMGLRDLCDALHGCYRENATAKALKSMYTALPELAIKPADA
YDRLVRGEVEAVPIDQLQGRIAAVMLVPYPPGIPLIMPGERFTAATRSILDYLAFARTFD
QAFPGFDIDVHGLQTEAGEYSVDCLVE
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtataaagatctcaagtttcccgtcctaatcgtgcaccgcgatatcaaggccgatacc
gtggccggtgatcgcgtgcgcgccatcgcgcaggagctcactcaggacggattcagcatc
ctgcccacggcgaacgccgccgaggggcgcatcgtcgcctccacccatcacggtctggcc
tgcattctggtggccgccgagggagcgggggagaacagccgcctgctgcaggacatggtc
gagctgatccgtgtggcccgagtgagggcgccacaattgccgatcttcgccctgggcgag
caggtcaccatcgagaacgcgcctgccgaggccatggccgatctcaaccacctgcgcggc
atcctctatctctacgaagacaccgtgtccttcctggcccggcaggtggcgcgggcggcg
cacaattaccttgatgggctgctgccgcccttcttcaaggcattggtgcaacacaccgcg
caatccaactattcctggcatacgccgggtcatggcggtggcgtggcctatcgcaagagt
ccggtaggccaggctttccaccagttctttggtgaaaacaccctgcgctcggacctgtcg
gtctctgtgccggagctgggttcgctgcttgaccacactggcccgctggccgaagctgag
gctcgtgccgcgcgcaacttcggcgccgaccataccttcttcgtgatcaacgggacctcg
acggcgaataagatcgtctggcattccatggtcggtcgcgatgatctggtgctggtggat
cgcaactgccacaaatcgatcctgcattcgatcatcatgaccggcgcgattcctctgtac
ctgtgccccgagcgtaacgagctgggcatcattgggccgattccgctttccgagttcagc
agggagtcgatccaggccaagatcgaggccagcccgctagctcgcggtcgtgcacccaag
gtcaagctggcggtggtgaccaactccacctatgacgggctctgctacaacgccgagatg
gtcaagcaggcccttggtgattcggtcgaagtactgcatttcgatgaggcctggtatgcc
tatgcggcgttccatgagttctacgccggccgttatggcatgggcacccaatgtgacgag
cagtcgccgctggtgttcaccacccattccacgcacaagctgctggcggcgttcagtcag
gcgtcgatgattcacgtgcaggatggtggtcagcgccaactggaccgtgaccgcttcaac
gaagctttcatgatgcacatctccacttcgccgcagtacggcatcatcgcctcgctggat
gtggcctcggcgatgatggaggggccggccgggcgttcgctgattcaggaaaccttcgac
gaggcgctgagcttccgtcgcgccttggctaacgtgcgccgtaacctgagcgccgaggac
tggtggttcagtatctggcagccgggcgccgccgacggtgccgacagcctgtcgaccgca
gactgggtgctgcagccagacgccgattggcatggcttcggcgaagtggccagcgactac
gtgctgctcgatccgatcaaggtcacgctggtgatgccgggcctcaatgccgccggcaag
ctggagcagcagggcattcctgccgcggttgtcagcaaattcctctgggagcgtggtctg
gtggtggaaaagaccggcctgtactccttcctggtgctgttctccatgggcattaccaag
ggcaagtggagcacgctgctgaccgaattgctggagttcaaacgcagctacgatgccaac
ctgccgctgatcgatgtgttgccctccatcgcccacgcgggcggtgggcgttatcaaggt
atgggcctgcgtgacctgtgtgacgcgttgcacggttgctaccgcgaaaacgccacggcc
aaggcgctgaagagcatgtacacggcgttgcctgagctggcgatcaaaccggccgacgcc
tatgaccggcttgtgcgcggtgaggtggaggcggtacccatcgatcagttgcaggggcgt
atcgctgcggtgatgctggtgccttatccgccaggcattccgctgatcatgccgggcgaa
cgcttcacggcggcgacgcgctcgattctcgactacctggcattcgccagaaccttcgat
caggccttcccgggttttgacatcgacgtgcatggcctgcaaaccgaggcgggcgagtac
agcgtggattgtttggttgaataa
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