Ectopseudomonas mendocina NK-01: MDS_2373
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Entry
MDS_2373 CDS
T01473
Name
(GenBank) isocitrate dehydrogenase, NADP-dependent
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk00020
Citrate cycle (TCA cycle)
pmk00480
Glutathione metabolism
pmk00720
Other carbon fixation pathways
pmk01100
Metabolic pathways
pmk01110
Biosynthesis of secondary metabolites
pmk01120
Microbial metabolism in diverse environments
pmk01200
Carbon metabolism
pmk01210
2-Oxocarboxylic acid metabolism
pmk01230
Biosynthesis of amino acids
pmk04146
Peroxisome
Module
pmk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pmk_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
MDS_2373
09102 Energy metabolism
00720 Other carbon fixation pathways
MDS_2373
09106 Metabolism of other amino acids
00480 Glutathione metabolism
MDS_2373
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MDS_2373
Enzymes [BR:
pmk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
MDS_2373
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Gene cluster
GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
AEB58404
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Position
complement(2595460..2597688)
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AA seq
742 aa
AA seq
DB search
MSTPSKIIYTFTDEAPALATYSLLPIVEAFAASADISVETRDISLAGRILASFADRLDAD
KRIDDDLAKLAELTLQPDANIIKLPNISASVPQLKAAIAELQAQGYNIPDFPEDPQSEED
KEVRARYAKVLGSAVNPVLREGNSDRRAPAAVKAYARKHPHSMGKWSMASQSHADYMRGG
DFFSSEQSITMAKAGDVRIEFVGKDGKVEVKKQLALQEGEVFDSMFMSCRKLRAFFEKTL
QDCKETGVMWSLHVKATMMKVSHPIVFGHAVSVYYKDVFDKYGDLFKELGVNPNNGISSV
YDKIKSLPASQQEEILHDIHEVYAHRPEMAMVDSVKGITNLHIPSDVIVDASMPAMIRNS
GQMWGKDGKQKDTKAVMPESTYARIYQEMINFCKTNGAFDPTTMGSVPNVGLMAQKAEEY
GSHDKTFEMTADGTMRVVAADGTVLMQHEVEAGDIWRACQTKDAPIRDWVKLAVTRARQS
DTPAIFWLDPERAHDRELQKKVELYLKDHDLTGLDIRMMGYNEAIRVSMERMIRGQDTIS
VTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMAGGGMYETGAGGSAPKHVQQLVEENYLR
WDSLGEFLALAVSLEETGIKTNNAKAKVLGKTLDQATGKLLDNNKSPARKVGEIDNRGSH
FYLALYWAQALAEQNDDAELKAHFAPLAKQLTEQEATIVAELAAVQGKPAEIGGYYRSNP
ELTSKVMRPSTTFNAALAALNA
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccttcgaagatcatctacaccttcaccgacgaagccccggcacttgccacc
tattcgcttctgcccatcgtggaagcctttgccgcctcggctgacatctccgttgaaacc
cgcgacatctctcttgctgggcgaatcctggcgagctttgccgaccgtctggacgctgac
aagcgcatcgatgacgacctggccaagctggctgagctgaccctgcagcctgacgccaac
atcatcaaactgccgaacatcagtgcctccgtccctcagctcaaggccgccatcgccgag
ctgcaggcccagggctacaacatcccggacttcccggaagatccgcagagcgaagaagac
aaggaagttcgcgcgcgttacgccaaggttctcggcagcgctgtcaacccggttctgcgc
gaaggcaactccgaccgccgtgctccggccgcggtaaaagcctacgcccgcaagcacccg
cacagcatgggcaagtggagcatggcttcgcagtcccacgccgactacatgcgcggcggc
gacttcttctccagcgagcagtcgatcaccatggccaaggccggtgatgtgcgtatcgag
ttcgtcggcaaggacggcaaggtcgaagtcaagaaacaactcgccctgcaggaaggcgaa
gtgttcgacagcatgttcatgagctgccgcaagctgcgcgccttcttcgagaagaccctg
caagactgcaaggaaaccggcgtaatgtggtccctgcacgtcaaggcaaccatgatgaag
gtctcccacccgatcgtcttcggtcatgccgtcagcgtttactacaaggacgtgttcgac
aagtacggcgacctgttcaaggaactgggcgtcaacccgaacaacggcatcagcagcgtc
tacgacaagatcaagtcgctgccagcctcgcagcaggaagaaatcctgcatgacatccac
gaggtttatgctcatcgcccggaaatggcgatggtcgactcggtcaagggcatcactaac
ctgcacatcccgagcgacgtcattgtcgacgcctcgatgccggccatgatccgcaactcc
ggtcagatgtggggcaaagatggcaagcagaaagacaccaaggcggtcatgcctgagagc
acctacgctcgcatctatcaggaaatgatcaacttctgcaaaaccaacggtgcgttcgac
ccgaccaccatgggcagcgtgccgaacgttggcctgatggcgcagaaagccgaagaatac
ggctctcacgacaagaccttcgaaatgaccgccgacggcaccatgcgcgtcgtagctgcc
gatggcaccgtgctgatgcagcacgaagtcgaagctggcgatatttggcgcgcctgccag
accaaggacgccccgatccgcgactgggtcaagctggccgttacccgtgcccgtcaatcc
gataccccggccatcttctggctggacccggagcgcgcccatgatcgcgagctgcagaag
aaagtcgagctgtacctcaaggatcacgatctgaccggtctggacattcgcatgatgggc
tacaacgaggccatccgcgtgtccatggagcgcatgatccgtggccaggacaccatctcg
gtgaccggtaacgtgctgcgtgactacctgaccgacctgttcccgatcatggagctgggt
acttcggccaagatgctgtccatcgttccgctgatggccggcggcggcatgtatgaaacc
ggcgccggcggctcggctcccaagcacgtacaacagctggtcgaagagaactacctgcgc
tgggattccctgggcgagttcctggccttggccgtatcgctggaagaaaccggcatcaag
accaacaacgccaaggccaaggtactgggcaagaccctggaccaggctaccggcaagctg
ctggacaacaacaagtccccggcgcgcaaggtgggtgagatcgacaaccgtggcagccac
ttctatctggcgctgtactgggctcaagccctggccgagcagaacgacgatgccgagctg
aaggctcacttcgcgccgctggccaagcaattgaccgagcaggaagcgaccatcgttgcc
gaactggctgccgtgcaaggcaagccggctgagatcggtggctactaccgctccaacccc
gagctgaccagcaaggtgatgcgacccagcactaccttcaatgccgctctggctgcactg
aatgcctga
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