KEGG   Ectopseudomonas mendocina NK-01: MDS_2517
Entry
MDS_2517          CDS       T01473                                 
Name
(GenBank) DEAD/DEAH box helicase domain-containing protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pmk  Ectopseudomonas mendocina NK-01
Brite
KEGG Orthology (KO) [BR:pmk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmk03400]
    MDS_2517
Enzymes [BR:pmk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MDS_2517
    5.6.2.6  RNA 3'-5' helicase
     MDS_2517
DNA repair and recombination proteins [BR:pmk03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    MDS_2517
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII QSOX_pErv
Other DBs
NCBI-ProteinID: AEB58548
LinkDB
Position
2760649..2763261
AA seq 870 aa
MDQPVRRRSPSHAWFTQHGWKPFAFQKEVWQAVKASESGLLHASTGSGKTYAVWFAALDR
FATPSPAVTASPRPRKKPVMAPLTVLWITPMRALAADTARALQAPLDDLQIAWDIGLRTG
DTSSAERARQSRKLPSTLITTPESLTLLLTRADAREAFAHLRMVVVDEWHELLGNKRGVQ
LQLALARLRLWQPELLVWALSATLGNLDHAREVLMPAGRLVQGKLAKYLRIDSLLPPELE
RFPWAGHLGLRMLPQVVEELDASSTALVFTNTRSQAETWYQALLEARPDWAGLLALHHGS
LSREVRDWVELALKEGRLKAVVCTSSLDLGVDFLPVERVLQIGSPKGVARLMQRAGRSGH
APGRPSRATLVPTHSLEVLEAAAAKTAVDERKVEARLSPDKPLDVLVQHLVSMALGGGFR
ADAMLAEVRSAWAYRHLSDEEWQWALAFIRHGGHSLTAYPDYRRAEPDANGLWQVPDARL
ARRHRMSIGTIVSDANLAVKYWSKGGGGGSLGSVEEGFIARLRPGDTFLFAGRPLELVRV
ENMIVYVRRATSRKAAIPRWNGGRMPLSSELADAVLAKLDAVAQAEYHGPEMQLLRPLLD
VQQAWSALPGAATLLAEVLKSREGWHLFLYPFAGRSVHLGLASLLAWRLAREQPLSLSIA
VNDYGLELLCPSEVDFAARLTPELFSTDDLLYDVLASLNAGELARRRFREIARIAGLVFS
GYPGAPKSTRQLQASSALFFDVFSQYDPGNLLLGQAQEEVLRQELDVQRLQHTLQRLQAR
RLDIRTVKRATPFAFPLLVERFRESLSSEKLADRIRRMVTDLEQAAGPGGYQDPAFTIDD
ERPAPRKGRSPRQGKDGLPRPPAQRPKKRR
NT seq 2613 nt   +upstreamnt  +downstreamnt
atggatcaacccgttcgccgtcgcagcccgtcccacgcctggttcacccagcacggctgg
aagcccttcgcctttcagaaggaagtctggcaggcggtcaaggcaagcgagtccggcctg
ctgcacgcctccaccggttccggcaagacctacgcggtgtggttcgccgccctggaccgt
ttcgccacgccctctcctgccgttaccgccagccctcgcccgcgcaagaaaccggtcatg
gcgccgctgacggttctgtggatcaccccgatgcgcgccctcgccgccgataccgcccgt
gccctgcaggcgccgctggatgacctgcagattgcctgggacatcggcctgcgcaccggc
gataccagtagtgccgaacgcgcccggcagagccgcaaactgccgagtacgctgatcacc
acgccggaaagtctgaccctgctgctgacccgtgccgacgcccgtgaggccttcgctcac
ctgcgcatggtggtggtggacgagtggcacgagctgctcggcaacaagcgcggggtgcag
ctgcaattggccctggcgcggctgcgtctgtggcagccggagctgctggtgtgggcgctg
tccgccacgctcggcaatctcgaccatgcccgcgaggtgctgatgccggccgggcgcctg
gtccagggcaagctggccaagtacctgcgcatcgacagcctgcttccacccgaactggag
cgcttcccttgggccgggcacctggggctgcgcatgctgccgcaggtggtcgaggagctc
gacgccagcagcactgcactggtgttcaccaacacccgctcccaggcggaaacctggtac
caggcgctgctcgaagcgcgtccggactgggccggcctgcttgccctacaccacggttcg
ctgtcgcgggaggtgcgcgactgggtcgaactggcgctcaaggagggccggctgaaagcc
gtggtctgcacgtccagcctggacctcggggtggatttcctgccggtggaacgggtgctg
cagatcggctcgcccaagggcgtagcccgcctgatgcagcgcgccggacgctccggccac
gcgccgggaaggccgtcacgcgcaaccctggtgccgacccatagcctggaggtgctggaa
gcggccgccgcgaaaaccgcggtggacgagcgcaaggtcgaggcgcggctatcgccggac
aaaccgctcgacgtgctggtccagcacctggtgagcatggccctgggcggcggtttccgg
gccgatgccatgctggccgaagtgcgcagcgcctgggcctaccgccacctcagcgatgag
gaatggcagtgggcgctggccttcatccgccacggtggccattcgctgaccgcctacccc
gattaccgccgcgccgagccggatgccaacggtctgtggcaggtgcccgatgcgcgcctg
gcgcggcgtcatcgcatgagcatcggcaccatcgtcagcgacgccaacctggcggttaag
tactggagcaagggcggtggtggaggttccttgggcagcgtcgaggagggtttcatcgcc
aggctgcgccccggcgataccttcctcttcgccggtcgcccgctggagctggtgcgggtg
gagaacatgatcgtttatgtgcgccgcgccaccagccgcaaggccgcgatcccacgctgg
aacggcgggcgcatgccgctctccagcgaactggcggacgccgtgctggccaagctcgat
gccgtcgcccaagctgaataccacggccctgagatgcagctgctgcgcccattgctcgac
gtgcagcaggcctggtccgccctgcccggcgccgccaccctgctggctgaggtgctcaag
tcccgcgaaggctggcatctgtttctctaccccttcgccggtcgttcggtgcatctgggg
ctggccagcctgctggcctggcgcctggcccgcgagcagccgctgagcctgtccatcgcg
gtcaatgattacggcctggaactgttgtgccccagcgaggtggatttcgccgcgcggctc
acgcccgagctgttcagcaccgacgacttgctgtacgacgtgctcgccagcctcaacgcc
ggggagctggcgcgccggcgctttcgcgagatcgcccgcattgccggcctggtgttcagc
ggctaccccggcgcgccgaagagcacccgccagctgcaggcctccagtgccctgttcttc
gacgtgttcagccaatacgacccgggcaacctgctgctcggccaggcccaggaggaggtg
ctgcgccaagaactggacgtacaacgcctgcagcacactttgcagcgcctgcaggcgcgc
cggctggatatccgcacggtcaagcgcgctacgccgttcgccttccccctgctggtggaa
cgctttcgcgaaagcctgagttcggagaaactcgctgaccgcatccggcgcatggtgacc
gatctggaacaggctgccggcccgggtggttatcaggacccggcattcaccatcgacgac
gagcgcccggcgccgcgcaaaggccgctctccgcgtcaaggcaaggacggcctgccaaga
ccaccagcgcagcgcccgaaaaaacgccgctga

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