Ectopseudomonas mendocina NK-01: MDS_2674
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Entry
MDS_2674 CDS
T01473
Name
(GenBank) periplasmic binding protein/LacI transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
pmk
Ectopseudomonas mendocina NK-01
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmk03000
]
MDS_2674
Transcription factors [BR:
pmk03000
]
Prokaryotic type
Helix-turn-helix
LacI family
MDS_2674
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
RNA_capsid
Motif
Other DBs
NCBI-ProteinID:
AEB58705
LinkDB
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Position
complement(2928140..2929159)
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AA seq
339 aa
AA seq
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MTQRRRRSAERVTLSDVAKAAGCSLMSASRALSQPGRVSDALREQVMRAAQALGYVPNPA
ARALASSRSNLVAVVIPSLSNSVFVDTVEAIQRVLMPAGFEMMIGVSHYRVEEDERLLRS
YLAHQPAGLLVTGFERSDAAREILGASSCPLVTLMELSEEPEDYCVGFSQIEAGAAMTRA
LVQRGYRHIAFAAAQLDPRTLQRAEGYRQVMHYLNRHDPALELLTPQLSSIGLGAELLDR
LLAQQPQIDAVFFNNDDLAMGALFRARQLGLEVPGRLAIAGFNDLPAAAWMHPALSTVRT
TRGRIGELAANMLLALMRGETPEQHCIDVGFELVMRDSA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgactcaacgccgtcgccggtccgctgaacgcgtcaccttgtccgatgtggccaaggct
gcgggttgctcgctgatgtctgcttcgcgcgcgttgtcgcagccggggcgggtgtccgat
gcgctgcgtgaacaggtgatgcgggctgcgcaggcgctgggctacgtgcccaatccggcc
gcgcgggcgctggccagttcgcgctcgaacctggtggcggtggtgatcccgtcgctgtcg
aactcggtgttcgtcgataccgtcgaagccatccagcgtgtgttgatgccggccggtttc
gagatgatgatcggcgtcagccactaccgagtcgaggaagacgagcgcctgctgcgttcc
tacctggcgcatcaacccgccggcctgctggtgaccggtttcgaacgcagcgatgctgcg
cgcgaaatactcggtgccagcagctgcccgctggtgacgctgatggaactgagcgaagag
cctgaagactattgcgtcggcttctcacagatcgaggccggtgctgccatgacccgcgcc
ctggtgcagcgcggctaccgccacatcgccttcgccgcggcgcagctcgacccgcgtacc
ttgcaacgcgccgagggttatcgccaggtgatgcactaccttaatcgccatgatccggcg
ctggaactgctgacgccgcagctgtcgtccataggcctgggggccgagttgctcgatcgt
ctgctggcgcagcagccgcagatcgatgcggtgttcttcaacaacgacgacttggccatg
ggcgcgttgtttcgcgcgcggcaactggggctggaggtgccggggcgactggccatcgcc
ggcttcaacgacctgcctgcggcggcctggatgcatcctgctctaagtacggtgcgcacc
acgcgtggtcgtatcggcgagctggcggcgaacatgctgctggcgctgatgcgtggtgaa
acaccggagcagcactgcattgatgtcggtttcgaactggtgatgcgcgacagcgcctga
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