Ectopseudomonas mendocina NK-01: MDS_2920
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Entry
MDS_2920 CDS
T01473
Name
(GenBank) phenylalanyl-tRNA synthetase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MDS_2920
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmk01007
]
MDS_2920
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmk03016
]
MDS_2920
Enzymes [BR:
pmk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
MDS_2920
Amino acid related enzymes [BR:
pmk01007
]
Aminoacyl-tRNA synthetase
Class II (U)
MDS_2920
Transfer RNA biogenesis [BR:
pmk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
MDS_2920
Prokaryotic type
MDS_2920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
AEB58951
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Position
complement(3221809..3224187)
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AA seq
792 aa
AA seq
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MKFSEQWLRTWVNPDVSRDDLVARLSMVGLEVDAVQPVAGAFSGVVVGEILSAEQHPDAD
KLRVCQVSNGAETFQVVCGAPNARAGIKIPFAMIGAELPGDFKIKKAKLRGVESQGMLCS
ASELQISDDNSGLMELAADAPVGQDIRAYLNLDDVSIEIGLTPNRGDCLSLAGLAREVGA
MYSAAVSPVAIEAVALVHDEVRPVEVLAPKACPRYLGRVVRNVDLSRPTPLWMVERLRRS
DIRSIDAAVDITNYVMLELGQPMHAFDLAEINGGIRVRMAEEGEKLVLLDGQEVSLRADT
LVIADHGRALAIAGVMGGEHSGVSDTTRDLFLESAFFDNIAVAGKARSYGLHTDSSHRFE
RGVDSQLARQAMERATALLLEIVGGEAGPIIEVSSETDLPSAAPITLRAERISQMLGMDM
DGAEVERLLTALGLSVSAQGAGQWQVSVPSHRFDISLEVDLIEELGRLYGYNRLPVRYPQ
ARLAPQVKAEARAELPALRRLLVARGYQEAITYSFIDPKLFELFTPGVEPLQLANPISAD
MAAMRSSLWPGLVKALQHNLNRQQSRVRLFESGLRFVGQLEGLQQEAMIAGVISGSRLPE
GWANSRENVDFYDLKADVEALLGYAGAADAFSFVPGEHPALHPGQTARIERGGRLVGFIG
ALHPELAKTLGLDQPVFLFELVLAEVAAGRMPAFSELSRFPEVRRDLALLVDREQPADAV
LSAIRENAGEWLTDLKLFDVYHGKGIDPLRKSLAVGLTWQHPSRTLNDDEVSTTTQNILT
CLEQRFNATLRK
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcagtgaacagtggctgcgtacctgggtgaatcccgacgtatctcgagacgat
ctggtcgcgcgcctgtccatggtcggcctcgaagtcgatgcagtgcagccggttgccggt
gccttcagtggtgtggtggtcggtgagatcctcagtgccgagcaacacccggacgccgac
aagctgcgtgtatgccaggtgagcaatggcgccgagaccttccaggtcgtttgcggtgct
cccaatgcgcgcgccggtatcaagattccgtttgccatgatcggcgccgaactgccgggc
gacttcaagatcaagaaggccaagctgcgcggcgtggaatcccagggcatgctgtgttca
gcttccgagctgcagatcagcgacgacaacagtggcctgatggagctagcggccgacgcg
ccggtcgggcaggacatccgtgcctacctgaatctggatgatgtcagcatcgaaatcggc
ctgacccctaatcgtggtgactgcctgtcgctcgccggtctggcccgtgaagtcggcgcc
atgtacagcgccgcagtttcgccggtggccatcgaagccgttgcgcttgtgcatgacgaa
gtgcgtccggtcgaggtgctggcgcccaaggcttgcccgcgttatctcggtcgcgttgtg
cgtaacgtcgatctgtctcgcccgactccgctgtggatggtcgaacgtctgcgtcgctcc
gatatccgcagtatcgatgcggcggtggacatcaccaactacgtgatgctcgaactgggt
cagcccatgcatgccttcgatcttgccgagattaacggcggcatccgcgtgcgtatggcg
gaagagggcgaaaagctggtgctgctcgatggtcaggaagtcagcttgcgtgctgataca
ctggtcattgctgatcatggtcgtgctctggctatcgcaggcgtgatgggcggcgagcac
agtggcgtgagcgacacgacgcgtgatctgttcttggaaagcgccttcttcgacaacatc
gccgttgccggtaaggcccgctcctatggcctgcacacggactcttcacaccgcttcgag
cgtggcgtggattcgcaactggcgcgccaggcaatggagcgcgcgactgcgctgttgttg
gagatcgtcggcggcgaagccggtccgatcattgaagtcagcagcgagaccgatctgccg
agcgcggcgccgatcactctgcgtgccgagcgtatcagccagatgttgggcatggatatg
gacggcgccgaagtcgaacgcttgctcactgcgctgggtttgagtgttagcgctcagggc
gctggtcagtggcaggtcagcgtgcccagtcaccgtttcgacattagcctggaagtggat
ctgatcgaagagctgggccgtttgtacggctacaaccgtctgccggtgcgttaccctcag
gcgcgtctggcgccgcaggtgaaggctgaagcgcgcgccgagctgcccgcgttgcgccgc
ctgctggtcgctcgcggctatcaggaagcgatcacctatagcttcatcgaccccaagctt
ttcgaactcttcacgccgggcgttgagccgctgcaactggccaatccgatttccgccgat
atggccgccatgcgttcctcgctatggccgggcctggtcaaggcgctgcagcacaacctc
aatcgccagcagtcgcgcgtgcgtctgttcgagagcggcctgcgttttgttggtcagctg
gaaggtctgcagcaggaggcgatgatcgctggcgtgatcagtggcagtcgtcttcccgag
ggctgggccaatagccgcgagaatgtcgacttctatgacctgaaggctgatgtcgaggcg
ctgctgggctatgccggtgcggccgacgccttcagcttcgtgccaggcgagcatcctgct
ttgcacccagggcagaccgcccgtatcgagcggggagggcgcctggtcggcttcatcggt
gccttgcacccggagcttgccaagaccttggggctggatcagccagttttcctcttcgaa
ctggtgctggcggaagtcgctgccggtcgtatgccggcgttcagcgaattgtcgcgcttc
cccgaagtgcgtcgtgatctggcgctgctggtcgatcgcgagcagccagcggatgccgtg
ttgtcggcaatccgagaaaatgcaggcgaatggctgacagacctcaagctatttgacgtc
tatcacggtaaaggtattgatccgcttagaaaaagccttgccgtcggcttgacctggcaa
catccatcgcgcactcttaatgacgatgaggtgagtactactacgcaaaacatcctcacc
tgcctcgaacaaaggttcaacgccacgttaaggaagtag
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