Ectopseudomonas mendocina NK-01: MDS_3047
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Entry
MDS_3047 CDS
T01473
Name
(GenBank) ABC transporter related protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MDS_3047
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmk02000
]
MDS_3047
02044 Secretion system [BR:
pmk02044
]
MDS_3047
Transporters [BR:
pmk02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
MDS_3047
Secretion system [BR:
pmk02044
]
Type I secretion system
Adhesin protein transporter
MDS_3047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_33
AAA_21
AAA_22
Peptidase_C39
AAA_16
DUF87
AAA_29
ATP-synt_ab
MeaB
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AEB59078
LinkDB
All DBs
Position
3367493..3369652
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AA seq
719 aa
AA seq
DB search
MTTMERPGPASDPRLSHDDPLLDGLLILCRLHGCSVSRGSLSAGLPLPAQRLSPDLLARA
AARAGLQGRLLQRDLASISPLNLPVLLLLKDGRSAVLRQWGPKQQAQILPCETDGGEQWV
SREQLAAEYSGQAFFARPRHELEEARTPLVPRIEAWFRDTLKLSRWLYTDAVLASLLINL
LGLMVPLFVMQTYDRVVPNQATSTLWVLAIGLLIGTGFELLLKVLRAHLLDTAGKKTDVV
LSATLFERITGMSMKARPATIGGFAQSIHDFQGLRDFLTAVTLTSLIDLPFSLLMLLVIG
LIGGPLVVIPVLAFPITILFAWIIQVRLRDTVQKSLQLGSQRQALLIETLGGLEMLKVCG
AESERQHQWEQTHGALTRLDAHAKFLASLATNGTLFLQQFAGMATIISGVYLIIAGNLSV
GALVACYMLGSRILAPLGQIAGLITRYQQARLTMTSTDALMALPQERQDKQRPLDRTQLK
GALDVRQISFTYPGQSAPALNNVSLRLGAGERLGIIGRSGSGKSTLARLMMAFYSADEGQ
ILLDNLDLRQLDVADLRHQIGYVAHDLPLLAGSLRDNLTLGARYISDTRMLEVAELTGVV
DLARQHPQGFDRPVGERGQLLSGGQRQAVLLARALLLDPPILVLDEPTSAMDNTSEDLLR
QRLHSWVQGKTLILITHRASMLSLVDRLAVLDNGHVVADGPKDAVIEALRKGRVGPASL
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
ttgaccaccatggaacggccagggccagccagtgatccacggctcagtcacgacgatccg
ctgttggatggtttgttgatcctctgtcggttgcacggctgcagcgtcagtcgtggcagc
ctgagcgccggcttgccattgccggcccagcgccttagccccgatctgctggcccgcgca
gccgcacgggccggactgcaggggcgcctgctgcagcgtgatctggccagcatttcgccg
ctcaacctgcccgtgctgctgctgctcaaggatggccgcagcgcagtgctgcgccaatgg
ggaccgaagcagcaggcacagatactgccctgcgagactgatggcggcgagcagtgggtc
agccgcgagcaactggccgccgagtacagcggccaggccttcttcgcgcgtccacggcac
gagctggaggaagcccgtacaccactggtgccgcgcatcgaagcctggttccgcgacacc
ctcaagctgtcgcgctggctctacaccgatgcggtgctggccagtttgctgatcaacctg
ctgggcctgatggtgccgctgttcgtcatgcagacctacgaccgcgtggtgcccaaccag
gccacctcgacgctctgggtgctggccatcggtctgctgatcggcacgggtttcgagctg
ctgctgaaggtgctgcgagcgcacctgctggataccgccggcaagaagaccgatgtggtg
ctctccgccacgctgttcgagcgcatcaccggtatgtcgatgaaggcgcggccggcgacc
atcggcggcttcgcccagagcatccatgatttccagggattgcgggatttcctcaccgca
gtgaccctgaccagcctgatcgacctgcccttctccctgctgatgctgttggtaatcggc
ctgatcggcgggccactggtggtcattccagtactggccttccccatcaccattctgttc
gcctggatcatccaggtgcgcctgcgcgatacggtgcagaaaagcctgcaactcggctcg
cagcgccaggccctgctgattgaaacgctcggcgggctggagatgctcaaggtgtgtggc
gccgagagtgaacgccagcaccagtgggaacagacccatggcgccctcactcgcctggac
gctcatgccaagttccttgcctcgctggccaccaacggcaccctgttccttcagcagttc
gccggcatggccaccatcatttcaggggtctacctgatcatcgccggcaacctcagcgtc
ggcgcgctggtggcctgctacatgctcggcagccggattctcgcgccgctcggacaaatc
gccggactgatcacccgctaccagcaggcacgcctgaccatgaccagcaccgacgcgctg
atggccctgcctcaggagcgccaggacaaacagcgtccgctggaccgcacccagctcaag
ggggcgctggacgttcgccagatcagcttcacctatcccggtcagagcgcaccggcactg
aacaacgtcagcctacgcctcggcgccggcgagcggctcggcatcatcggtcgcagtggc
tcgggcaaaagcaccctggcgcgtctgatgatggcgttctacagcgccgacgaagggcag
atcctgctcgacaacctcgacctgcgtcagctcgatgttgccgacctgcgccatcagatc
ggctacgtcgcccacgacctgccgctgctggccggcagcctgcgcgacaacctcaccctc
ggtgcgcgttacatcagcgatacacgcatgctcgaagtcgccgagctaactggcgtggtc
gacctggcgcgccaacatccgcagggtttcgaccgcccggtgggcgagcgtggccaactg
ctctccgggggtcaacgccaggccgtgctgctggctcgcgcgctgttgctcgatcctccg
attctggtgctcgacgagccgaccagcgccatggacaacaccagcgaagaccttttgcgc
cagcgtctgcacagctgggtccagggcaagaccctgatcctcattacccatcgtgcctcc
atgctcagcctggtcgaccgcctggccgtgctggacaacggtcatgtagtggcggatggg
ccgaaggatgccgtcatcgaagccttgcgcaagggccgcgtcggcccggccagcctgtag
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