Ectopseudomonas mendocina NK-01: MDS_3169
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Entry
MDS_3169 CDS
T01473
Name
(GenBank) putative TonB-dependent exported protein
KO
K02014
iron complex outermembrane recepter protein
Organism
pmk
Ectopseudomonas mendocina NK-01
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmk02000
]
MDS_3169
Transporters [BR:
pmk02000
]
Other transporters
Pores ion channels [TC:
1
]
MDS_3169
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_4
Motif
Other DBs
NCBI-ProteinID:
AEB59200
LinkDB
All DBs
Position
complement(3502099..3504411)
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AA seq
770 aa
AA seq
DB search
MRRMTVALCCVACWPAVGLGETEVLQLEDISVVGASHRLESARQVPGSVLAVDGERLGEA
GLDDLGALAQRVPGLMLSAPNPRYTAIGIRGLGSSSANDGLDGSVAVYLDGVYLGRQGMI
PQDFVDIDRLEILRGPQATLYGKNATAGAINLSSRMPSFVNEGQGEVRMGEDGLRHYRAS
LSGPLVDEVLAARLSVYDLSRDGDIDNRFNGRQLDEQDRQGLRGQLLWAPNERFSARLIG
EYAVQDESAVLTASHLSATTRQRAAFVGYQPLPVAPFARRVEQNDDNSLHTVQRGLTLQL
DQHLDNELTLTSITGYRDWDYDSRYDADSMALSVARSAVELDHRQFSQELRLAQSLGERF
DYLLGAYYLQQRLQRDVDVAFGRDAAAFFLGDRPEVTALGITPGMVPPSLLQGAEQHFRG
GQDSDTQAVFGQFTWRPTERLAITPGLRYSRERKRGEIIRRVDGLAPLGMDPVSQLGGQL
LRDIALGGAYERRNRITENNLSGQLALSYQFNDALMGYARWSRGYKAGGINLEVTGDAIA
PVFDAERATALEVGIKSRWWDERLALDVALYQTDVDDYQALSNSEPADELSPPLRDSLIN
VGKVRLRGIEVDGRLQLTSQVAWHLGLALNDARYRSFDNAPCPPESGVLSCDLSGKRLFN
APRWSLASGLDYRRPLEAGLELFGALDYSWRSGYYGVLERGTGSYQSAYGLTDLRLGIGQ
ADQRWAVELWARNLFDQDYASAFYATLGSGDYGLLPGAPRSLGMTLRARY
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaggcggatgacggtggcgttgtgctgcgtggcgtgctggcctgccgtgggcctgggc
gagaccgaggtgctgcagctcgaagacatcagtgtggtgggggccagccatcgcctcgaa
tcggcccggcaggtgccaggcagcgttctggccgtcgacggcgagcggctgggcgaggcc
ggcctggatgatctcggcgccctggcgcagcgtgtgccgggtttgatgctgagcgcaccc
aatccgcgttacaccgctatcggtatccgtgggttggggtcgagttcggccaacgatggg
ctcgatggcagcgtggcggtgtacctcgatggcgtgtacctggggcgtcagggcatgatc
ccgcaggatttcgtcgatatcgaccggctggaaatcctccgtggcccgcaagccaccttg
tacggcaagaacgccacggcgggggcgatcaacctgagcagccggatgccgagcttcgtc
aacgaagggcagggcgaagtgcggatgggcgaggatggcctgcgtcattaccgcgccagc
ctgtccgggccgctggtcgacgaggtgctggcggcgcgcctgagtgtctatgacctgagc
cgcgacggcgatatcgacaaccgcttcaatggccgccagctcgacgagcaggatcgccag
gggctgcgcgggcaattgctgtgggcgcccaacgagcgcttcagcgcccggctgatcggc
gagtacgcggtacaggatgaaagcgcggtgctcaccgccagccacctgagcgcgacgacc
cgccagcgcgccgccttcgtcggctaccagcccttgccggtggcgccctttgcccgccgc
gtcgagcagaacgacgacaacagcctgcataccgtgcagcgcggcctgaccctacagctc
gaccagcatctggataacgaactgaccctgaccagcatcaccggctaccgcgactgggat
tacgacagccgctacgacgccgacagcatggcgctctcggtggcacgctcggcggtggag
ctcgatcatcgccagttcagccaggagctgcgcctggcgcaatcgctcggcgagcgcttc
gattacctgctgggcgcctactacctgcaacagaggctgcaacgggacgttgacgtggcc
ttcggccgtgatgccgcggcgttcttcctcggcgaccggccggaggtcactgccctcggc
atcacccccggcatggtgccaccttcgctgttgcagggcgccgagcagcactttcgcggc
gggcaggatagcgacacccaggccgtgttcggccagttcacctggcgccccacggagcgt
ttggccattaccccgggcttgcgttacagccgcgagcgcaaacgtggcgagatcatccgg
cgggtcgatggcctggcgccgcttggtatggatccagtgtcgcaactgggtggccaactg
ctgcgcgatatcgccctgggcggcgcctatgagcggcgcaaccgcatcacggagaacaac
ctttctgggcaactggcgctcagttatcagttcaatgacgcgctgatgggctatgcgcgc
tggtcgaggggttacaaggccggtggcatcaacctggaggtcactggcgatgccattgcc
ccggtgttcgacgccgagcgcgcgacggcgctggaggtgggcatcaagagccgttggtgg
gacgaacgcctcgcactcgacgtggcgctgtaccagaccgacgtggacgactaccaggcg
ctcagcaacagcgagccggccgacgaactgtcaccgccgctgcgcgacagcctgatcaac
gttggcaaggtgcgcctgcgcggcatcgaggtggacgggcgcctgcaactgacgtcccag
gtagcttggcacctgggcctggccttgaacgatgcgcgctaccgctccttcgacaatgcg
ccctgcccgccggaaagcggggtgttgtcgtgcgacctgtccggcaagcggctgttcaat
gcgccgcgctggagcctggccagcgggcttgactaccgcaggccgctggaggccgggctg
gagctgttcggcgcgctcgattacagctggcgcagtggctactacggtgtgctggagcgc
ggcaccggcagctaccagtcggcttacggcctgaccgacctgcgcctgggcatcggccag
gccgaccagcgctgggccgtggagctgtgggcgcgcaacctcttcgaccaggattacgcc
agcgccttctacgccaccctgggttccggtgactacggcctgttgccgggtgcgccgcgc
agccttggaatgaccctgcgcgcgcgctactaa
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