Ectopseudomonas mendocina NK-01: MDS_3248
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Entry
MDS_3248 CDS
T01473
Name
(GenBank) L-carnitine dehydratase/bile acid-inducible protein F
KO
K01796
alpha-methylacyl-CoA racemase [EC:
5.1.99.4
]
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk00984
Steroid degradation
pmk01100
Metabolic pathways
pmk01120
Microbial metabolism in diverse environments
pmk04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00984 Steroid degradation
MDS_3248
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MDS_3248
Enzymes [BR:
pmk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.99 Acting on other compounds
5.1.99.4 alpha-methylacyl-CoA racemase
MDS_3248
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Motif
Pfam:
CoA_transf_3
Motif
Other DBs
NCBI-ProteinID:
AEB59279
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All DBs
Position
complement(3597597..3598778)
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AA seq
393 aa
AA seq
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MSGPLSSLKILDFSTLLPGPFASLLLADMGAEVLRVESPTRMDLVRLLPPHEGGTSTSHA
YLNRNKRSIALDLKRPEAVEVVKQLVGEYDIVLEQFRPGVMDKLGVGYEALKAVNPRLIY
VSITGYGQSGPYRDRAGHDINYLALAGIASYTGRQDSGPLPLGVQLADLAGGSLHGVIGL
LAAVVQRQISGQGQQVDVSMTDCAFSLHGMAGAGYLGAGVEPGMENQALNGGSFYDYYRT
RDGRWFSVGSLEPQFMQQFCAAIGRPELAARGLSQKPEDQRALKREIEIEFEKRDFAQWS
QVFAELDACVEPMLPLSEAVQHPQIRSRELVVEVPREGLPAQAQLACPLKFSDGLPPPQH
VGAALGAHTEQVLEELGYDAERIAALREARVFG
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggcccttgtcatcgctgaagattctcgatttttccacactgctgccggggccg
ttcgcgtcgctgctgttggccgacatgggcgccgaggtgctacgggtggagtcgcccacg
cgcatggatctggtacgcctgctaccgccgcacgagggaggaacgtccaccagccacgcc
tatctgaaccgcaacaagcgtagcatcgccctggacctcaagcggccagaggccgttgag
gtggtcaagcaactggttggcgagtacgacatcgtgctcgagcagttccgccccggcgtg
atggacaagctgggtgtcggctacgaagcgctcaaggcggtcaacccacgactgatctac
gtgtcgatcaccggttacggtcagagtggaccttaccgtgatcgcgccgggcacgatatc
aactacctggcgttggccggcatcgccagttacacagggcgccaggacagcggcccgctg
ccgctcggcgtgcaactggccgacctggcgggtggttcgctgcatggggtgatcggtctg
ctcgcggcggtggtgcaacgtcagatcagcggccagggccagcaggtcgatgtgagcatg
accgactgcgccttcagcctgcacggcatggctggcgccgggtatctcggtgctggcgtg
gagcccggcatggaaaaccaggcgctcaatggcggcagcttctatgactactaccgcacg
cgcgatggccgctggttttccgtcggcagcctggaacctcagttcatgcagcagttttgc
gccgcgattggtcgccccgagctggccgcgcgtggtttgtcgcaaaagcccgaggaccag
cgcgcgctcaagcgcgagatcgagatcgagttcgagaagcgcgattttgcgcaatggagt
caggtgttcgccgaacttgatgcctgcgtcgagcctatgctgccgctgtccgaagcggtg
cagcatccgcagatcaggtcgcgcgaactggttgtcgaggtgccgcgtgaaggcttgccg
gcgcaggcgcaactggcctgtccgctgaagttctccgacggtttgccgccgccgcaacat
gtaggggccgcgctcggtgcgcataccgagcaggtactggaggagctgggttacgacgcc
gagcgaattgccgcgttgcgcgaggcacgcgtgttcggttga
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