Ectopseudomonas mendocina NK-01: MDS_3423
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Entry
MDS_3423 CDS
T01473
Name
(GenBank) DNA-binding transcriptional regulator HexR
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
pmk
Ectopseudomonas mendocina NK-01
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmk03000
]
MDS_3423
Transcription factors [BR:
pmk03000
]
Prokaryotic type
Helix-turn-helix
Other families
MDS_3423
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
DUF8299
HTH_AsnC-type
HTH_31
HTH_Crp_2
HTH_IclR
DUF8452
HTH_24
TetR_N
RWP-RK
HTH_26
Motif
Other DBs
NCBI-ProteinID:
AEB59454
LinkDB
All DBs
Position
3785672..3786541
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AA seq
289 aa
AA seq
DB search
MDRVRNLLEQIQSRLDDLNKAERKVAEVILHDPQQATRFSIAALAQAAGVSEPTVNRFCR
SFGANGYPELKMQLAQSLASGAAYVSRAVSADDGPEAYTRKIFGSTIASLDSACQSLDPQ
HVSRAVDLLIQARQIHFFGLGASASVALDAQHKFFRFNLAVSAHSDVLMQRMIASVAHTG
DLFVIISYTGRTRELVEVARLARENGASVLGLTAAGSPLAKASTLSLDIPLPEDTDIYMP
MTSRIIQLTVLDVLATGVTLRRGVDFQPHLRKIKESLSASRYPADEEPL
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggaccgagtgcgcaacctgctggaacagatccagagccgcctggacgacctgaacaag
gccgaacgcaaggtcgccgaagtgatcctgcacgatccgcagcaggccactcgtttcagc
atcgccgcactggcacaggcggccggggtcagcgagccgacggtcaatcgcttctgccgc
tcgttcggcgccaacggctacccggagctgaagatgcagctggcgcagagcctggccagt
ggcgctgcctacgtcagtcgcgcggtgtccgccgacgacggccccgaggcttacacccgg
aagattttcggcagcaccattgcctcgctggacagcgcctgccagagcctcgacccgcaa
cacgtcagccgcgccgtcgacctgctgatccaggcacggcagatccacttcttcggcctc
ggcgcctcggcctcggtggcgctggatgcgcagcacaagttctttcgcttcaacctcgcg
gtttcggcccactccgacgtgctgatgcaacgcatgatcgcctcggtggcgcacaccggt
gatctgttcgtgatcatttcctacaccgggcgcacccgcgagctggtggaagtggcgcgc
ctggcacgtgagaacggcgcctcggtactcggcctcaccgccgccggctcgccgctggcc
aaggccagcaccctgagcctggacattccgctgccggaagacaccgacatctacatgccg
atgacttcacgcatcatccagctcaccgtactcgacgtgctcgccaccggcgtcaccctg
cgccgcggcgtcgacttccagccgcacctgcgcaagatcaaggaaagcctcagcgccagc
cgctacccggcggacgaagagccactgtag
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