Ectopseudomonas mendocina NK-01: MDS_3571
Help
Entry
MDS_3571 CDS
T01473
Name
(GenBank) DNA-binding response regulator
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk02020
Two-component system
pmk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MDS_3571
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MDS_3571
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pmk02022
]
MDS_3571
Two-component system [BR:
pmk02022
]
OmpR family
QseC-QseB (quorum sensing)
MDS_3571
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
FleQ
GlnR_1st
Motif
Other DBs
NCBI-ProteinID:
AEB59602
LinkDB
All DBs
Position
3934043..3934699
Genome browser
AA seq
218 aa
AA seq
DB search
MRILLVEDDQALGEGIRTALKPEGYTVDWLQDGASALHALSHESFELAILDLGLPRMDGL
QVLKHLQAAANPVPVLVLTARDATSDRIAGLDAGADDYLIKPFDVAELKARLRALLRRSF
QRPQPALEYRGIRLDPASQVVEYQGQTINLPRKEFLLLHELLIQPGRVLTRDKLQQALYG
WDEEVESNALEVHVHHLRKKFFPELIRTVRGVGYLVDK
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattcttctcgtcgaagacgaccaggccctgggcgaaggcattcgcaccgcgctg
aaacccgaaggctataccgtggactggctgcaggacggcgccagcgcgctgcatgcgctg
agccacgagagtttcgaactggccattctcgatctgggcctgccgcgcatggatggcctg
caggtgctcaagcacctgcaggccgcggccaacccggtgccggtgctggtgctgaccgcg
cgcgatgccaccagtgaccgcatcgccggcctcgatgccggtgccgacgactatctgatc
aaacccttcgacgtcgccgaactcaaggcgcgcctgcgcgccctgctgcgacgcagcttc
cagcgtccgcaaccagccctggaataccgcggcatccgcctcgacccggcgagccaggtg
gtcgagtaccagggccagaccatcaacctgccgcgcaaggaattcctcttgctgcatgag
ctgctgatccagcctggtcgcgtactgactcgcgacaagctgcaacaggccctctatggc
tgggacgaggaagtggaaagcaacgccctggaagtgcacgtgcaccacctgcgcaagaaa
ttctttccggagctgatccgcaccgtgcgcggcgtcggttatctggtggacaaatga
DBGET
integrated database retrieval system
