Pseudomonas mendocina NK-01: MDS_3672
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Entry
MDS_3672 CDS
T01473
Name
(GenBank) DeoR family transcriptional regulator
KO
K02444
DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
Organism
pmk
Pseudomonas mendocina NK-01
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmk03000
]
MDS_3672
Transcription factors [BR:
pmk03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
MDS_3672
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_PafC
GntR
HTH_20
MarR_2
HTH_Crp_2
HTH_28
MarR
HTH_24
Put_DNA-bind_N
HTH_29
LexA_DNA_bind
FeoC
HTH_36
Rrf2
Fe_dep_repress
AbiEi_4
HTH_Mga
HTH_IclR
DDRGK
Cullin_Nedd8
Sigma70_r4
RuvB_C
Sigma70_r4_2
HTH_23
MerR
RPA_C
PqqD
Motif
Other DBs
NCBI-ProteinID:
AEB59703
LinkDB
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Position
4042385..4043143
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AA seq
252 aa
AA seq
DB search
MNLAPRQQDILNLARERGYVSIDELAQAFAVTPQTIRRDINQLAEHGLLRRTHGGAACEA
SSIQNTAYGMRAGQMREEKQRIAEAVAAQIPDHASLFINIGTTTEAIARELQSHKGLKII
TNNLHVAAQLSAKADFEVLVAGGTVRSDGGIVGQAAVDFIQQFKVDYAIVGISGIDDDGS
LLDFDYQEVRVSQAIIDNARQVFLAADSSKFGRNAVVRLGSIALVNRVFTDSAPSATIIR
LLHSHKVQLDLV
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcgctccccgccagcaggacatcctcaatctcgcccgcgagcgcggctacgtc
agcatcgacgaactggcccaagcgttcgccgtcaccccgcagaccattcgccgcgacatc
aatcagttggccgaacacggcctattgcgccgcacccatggaggtgccgcctgcgaagcc
tcgagcattcagaataccgcctacggcatgcgcgccgggcagatgcgcgaggagaagcaa
cgtatcgccgaggccgtggcggcgcagattcccgatcacgcttcgctgttcatcaacatc
ggcaccaccaccgaagccattgcccgcgaactgcagagtcacaagggcctgaagatcatc
accaacaacctgcacgtcgccgcccagctcagcgccaaggccgatttcgaggtgctggta
gctggcggcacggtgcgcagcgatggcggcatcgtcggtcaggccgcggtggatttcatc
cagcagttcaaggtcgattacgccatcgtcggcatcagcggcatcgacgacgacggcagc
ttgctcgatttcgactaccaggaagtccgcgtttcacaggccatcatcgacaatgcgcga
caggttttcctcgccgccgactccagcaagttcgggcgtaacgccgtggtgcgcctgggc
tccattgccctggtcaaccgagtcttcaccgacagcgcgccctcggccaccattatccgc
ctgctgcatagtcacaaggtccagctcgatctggtctga
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