Ectopseudomonas mendocina NK-01: MDS_3697
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Entry
MDS_3697 CDS
T01473
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
MDS_3697
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmk01007
]
MDS_3697
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmk03016
]
MDS_3697
Enzymes [BR:
pmk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
MDS_3697
Amino acid related enzymes [BR:
pmk01007
]
Aminoacyl-tRNA synthetase
Class II (A)
MDS_3697
Transfer RNA biogenesis [BR:
pmk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
MDS_3697
Prokaryotic type
Other AARSs
MDS_3697
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
AEB59728
LinkDB
All DBs
Position
complement(4068185..4069687)
Genome browser
AA seq
500 aa
AA seq
DB search
MSDQQLDHNELQQEENKLIAQRKEKLAAVREQGIAFPNDFRRDSLCAELQKQYEGKSKEE
LEAAAIPVKIAGRIMLNRGAFMVLQDTSGRLQVYVDRKGLPAETLEAIKTWDLGDIIAAE
GTLARSGKGDLYVHMTNVRLLTKSLRPLPDKHHGLTDTEQRYRQRYVDLIVNEETRHTFR
VRSQVIAHIRRFLNDRGFLEVETPMLQTIPGGAAAKPFETHHNALDMAMFLRIAPELYLK
RLVVGGFEKVFEINRNFRNEGVSTRHNPEFTMLEFYQAYADYRDNMDLTEELFRELALAV
LGTTDVPYGDKVFHFGEPFVRLSVYDSILKYNPDITEADLNDVDKARSIAKKAGAKVLGH
EGLGKLQVMIFEELVESKLEQPHFITEYPFEVSPLARRNDQNPNVTDRFELFIGGREIAN
AYSELNDAEDQAERFLAQVAEKDAGDDEAMHYDADFVRALEYGMPPTAGEGIGIDRLVML
LTNSPSIRDVILFPHMRPQA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccaacaactcgaccacaacgaactgcaacaggaagaaaacaagctgattgcc
cagcgcaaggaaaagcttgctgccgtccgtgagcagggcattgccttccccaacgatttc
cgccgcgacagcctgtgcgccgaactgcagaaacagtacgagggcaagagcaaggaagag
ctggaggccgctgccattccggtgaagatcgccggtcgcatcatgctcaaccgtggtgcc
ttcatggtgttgcaggacacctccggtcgtctgcaggtctacgtcgaccgcaagggcctg
cctgccgagacccttgaagcaatcaagacctgggacctgggtgacatcatcgctgccgaa
ggtaccctggcacgttccggcaagggtgacctgtacgtgcacatgaccaatgtgcgcctg
ctgaccaagtcgctgcgcccgctgccggacaagcaccacggcctgaccgacaccgagcag
cgctaccgccagcgctacgtcgatttgatcgtcaacgaggaaacccgtcacaccttccgc
gtacgttcgcaggtgatcgcgcacatccgccgcttcctcaatgaccgcggtttcctcgaa
gtggaaaccccgatgctgcagaccatccccggtggcgcggcggccaagccgttcgagaca
catcacaatgcgctggacatggccatgttcctgcgtatcgccccggagctgtacctcaag
cgcctggtggtcggtggtttcgagaaggtgttcgagatcaaccgcaacttccgtaacgaa
ggcgtatcgactcggcacaatcccgagttcaccatgctcgagttctatcaggcctatgcc
gactaccgcgacaacatggacctgaccgaggaactgttccgcgaactggccctggccgtg
ctgggcaccactgacgtgccgtatggcgacaaggtgttccacttcggcgagccgttcgta
cgcctgtcggtgtacgactcgatcctcaagtacaacccggacatcaccgaggctgacctg
aacgacgtcgacaaggcccgctccatcgccaagaaggccggcgccaaggtgctcggccac
gaaggcctgggcaaactgcaggtgatgattttcgaggaactggtggagagcaagctggag
cagccgcacttcatcaccgagtatccgttcgaggtgtcgccgctggcccgtcgcaacgac
cagaaccccaacgtcaccgaccgcttcgagctgttcatcggtggccgcgagatcgccaac
gcctactccgagctcaacgacgccgaggatcaggccgagcgcttcctcgcccaggtggcc
gagaaggacgccggtgacgacgaagccatgcactacgacgccgacttcgtgcgcgccctg
gagtacggcatgccgcccaccgccggtgaaggcatcggcatcgaccgcttggtgatgctg
ctgaccaactcgccgtcgatccgcgacgtcatcctgttcccgcatatgcgcccgcaggcc
tga
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