Ectopseudomonas mendocina NK-01: MDS_3942
Help
Entry
MDS_3942 CDS
T01473
Name
(GenBank) ATPase
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
pmk
Ectopseudomonas mendocina NK-01
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pmk03110
]
MDS_3942
Chaperones and folding catalysts [BR:
pmk03110
]
Heat shock proteins
HSP100
MDS_3942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
AAA_22
Sigma54_activat
IstB_IS21
nSTAND3
TniB
AAA_18
ATPase_2
AAA_24
Mg_chelatase
AAA_14
AAA_7
DNA_pol3_delta2
AAA_3
ABC_tran
bpMoxR
NBD_SMAX1
NACHT
ATP_bind_1
ABC_tran_CTD
GrpE
Motif
Other DBs
NCBI-ProteinID:
AEB59973
LinkDB
All DBs
Position
complement(4341382..4343946)
Genome browser
AA seq
854 aa
AA seq
DB search
MRIDRLTSKLQLALSDAQSLAVGMDHAAIEPLHLMQALLEQQGGSIKPLLMQVGFDINSL
RQGLTRELDQLGKLQNPTGDINLSQDLARLLNQADRLAQQKGDQFISSELVLLAAMDENT
KLGKLLLGQGVSKKALENAIANLRGGQAVNDPNVEESRQALDKYTVDLTKRAEDGKLDPV
IGRDDEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNGEVPDGLKDKRLLSL
DMGSLIAGAKFRGEFEERLKSVLNELGKQEGRIILFIDELHTMVGAGKAEGAMDAGNMLK
PALARGELHCVGATTLDEYRQFIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVH
HGVTITDGAIIAAAKLSHRYITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLI
QLKIEREALKKEDDEATKKRLVKLEEDIAKLEKEYADLEEIWKSEKAEVQGSAQIQQKIE
QAKTELESARRKGDLNRMAELQYGVIPDLERSLQMVDQHGKSENQLLRNKVTDEEIAEVV
SKWTGIPVSKMLEGEREKLLKMEGLLHQRVIGQDEAVVAVANAVRRSRAGLADPNRPSGS
FLFLGPTGVGKTELCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGG
YLTEAVRRKPYSVVLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNL
GSAQIQELVGDKEAQRAAVMDAVGSHFRPEFINRIDEVVVFEPLGREQIAGIAEIQLQRL
RGRLAERDLTLELTPEALDKLIAVGYDPVYGARPLKRAIQRWIENPLAQRILAGDFAPGA
KVKAKVEGEEIVFA
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgatcgtttgaccagcaagttgcaacttgcactttccgacgcccaatccctg
gctgtgggtatggaccacgccgccatcgaaccgctgcaccttatgcaagccttgctggag
cagcagggcggctcgatcaagccgctgctgatgcaggtcggcttcgacatcaatagcctg
aggcagggcctgacccgcgagctggaccagctcggcaagctgcagaaccccaccggtgac
atcaacctgtcgcaggatctggcgcgtctgctcaaccaggccgaccgtctggcacagcag
aagggtgatcagttcatttccagtgagctggtgctgcttgccgcaatggacgagaacacc
aagctgggcaagctgctgctcggccagggcgtgtcgaagaaagcgctggaaaacgccatc
gccaacctgcgcggcggccaggcagtgaatgatcccaatgtcgaggagtcgcgccaggcg
ctggacaagtacaccgtcgacctgaccaagcgcgccgaggatggcaagctcgatccggtg
atcggccgtgacgacgagattcgccgcaccattcaggtgctgcagcgccgcaccaagaac
aacccggtactgatcggtgagcccggcgtcggtaagaccgccatcgccgaaggcctggcc
cagcgcatcgtcaacggtgaggtgcccgatggcctcaaggacaagcgtctgttgtcgctg
gatatgggctcgctgatcgccggtgccaagttccgcggtgagttcgaggagcgcctgaag
tcggtgctcaacgaactgggcaagcaggaaggacgcatcatcctgttcatcgacgagctt
cacaccatggtcggggccggcaaggccgagggtgccatggacgctggcaacatgctcaag
cctgccctggctcgaggtgaactgcactgcgtcggcgcgaccacactggatgagtaccgc
cagttcatcgagaaggatgccgcgctggagcgtcgcttccagaaggtgctggtcgacgaa
ccgagcgaagaggacaccatcgccatcctgcgtggcctcaaagagcgctacgaggtgcac
cacggcgtgaccatcaccgatggcgcgatcatcgctgcggccaagctcagccatcgctac
atcaccgaccgccagttgcctgacaaggccatcgacctgatcgacgaggcggccagccgc
atccgtatggagatcgactccaagccggaggaactcgatcgtctggatcgtcgcctgatc
cagctgaaaatcgagcgtgaggcactgaagaaggaagacgacgaggcgaccaagaagcgc
ctggtcaagctggaagaagacatcgccaagctggagaaggaatacgccgacctggaagaa
atctggaagtcggaaaaggccgaggtgcagggttcggcgcagatccagcagaagatcgag
caggccaagaccgagcttgagtctgcgcggcgcaagggcgacctcaatcgcatggccgag
ctgcagtacggtgtgattccggatctggagcgcagcctgcagatggtcgaccagcacggc
aagagcgagaaccagctgctgcgcaacaaggtcaccgacgaggagatcgccgaagtcgta
tccaagtggaccggcatcccggtgagcaagatgctcgaaggcgaacgcgaaaagctgctg
aagatggaaggcctgctgcatcagcgggtgatcggccaggacgaagcggtggtggccgtg
gccaacgccgtgcgccgttcccgtgctggtttggccgatccgaaccggccgagcggctcg
ttcctcttcctcggcccgaccggggtgggcaagaccgagctgtgcaaggcgctggccgag
ttcctcttcgacaccgaggaggcgctggtgcgcatcgacatgtccgagttcatggagaag
cacagcgtcgcccgtctgattggtgcgccgcccggctacgtgggttacgaggagggcggt
tacctgaccgaggcggtgcgtcgcaaaccctactcggtggtgctgatggacgaggtggaa
aaggctcaccccgacgtgttcaacgtgctgttgcaggtgctggaagatggccgtctgact
gacagccacggccgcaccgtcgacttcaagaacaccgtgatcgtgatgacctccaacctc
ggctctgcgcagatccaggaactggtcggcgacaaggaagcacagcgcgccgcggtgatg
gatgcggtgggcagccacttccgccccgagttcatcaaccgtatcgacgaggtggtggtg
ttcgagccgctgggccgcgagcagatcgccggtattgccgagattcagctgcagcgtctg
cgtggccgcctggccgagcgcgatctgactctggagctgaccccggaggcgctcgacaag
ctgatcgccgtcggttacgacccggtgtatggcgcacgtccgctcaagcgtgcgatccag
cgctggatcgagaatccgctggcacagcgcatcctggctggcgacttcgcgcctggtgcg
aaggtcaaggccaaggtcgagggcgaggagatcgtcttcgcctga
DBGET
integrated database retrieval system
