Ectopseudomonas mendocina NK-01: MDS_4084
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Entry
MDS_4084 CDS
T01473
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pmk
Ectopseudomonas mendocina NK-01
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmk03016
]
MDS_4084
Enzymes [BR:
pmk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
MDS_4084
Transfer RNA biogenesis [BR:
pmk03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
MDS_4084
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AEB60115
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All DBs
Position
4487129..4488508
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AA seq
459 aa
AA seq
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MRGHFLTTSDSAMTKKLYIETHGCQMNEYDSSRMVDLLGEHQALEVTEKPEEADVILLNT
CSIREKAQDKVFSQLGRWRELKQANPDLVIGVGGCVASQEGAAIRDRAPYVDVVFGPQTL
HRLPEMIDAARVTKTAQVDISFPEIEKFDRLPEPRVDGPSAFVSVMEGCSKYCTFCVVPY
TRGEEVSRPLVDVLMEITSLTEKGVKEVTLLGQNVNGYRGEAPDGHIADFAELLHAVAAL
DGVERIRYTTSHPLEFSDAIIAAHAEIPQLVKYLHLPVQSGSDRILAAMKRNHTALEYKS
RIRKLRAAVPDILISSDFIVGFPGETEKDFEQTMKLIEDVGFDFSFSFIYSSRPGTPAAD
LVDDTPEEVKKQRLALLQHRINQNGFENSRRMVGTVQRILVSDYSKKDPGMLQGRTEQNR
IVNFRCDNPRLIGQFVDVHIDDALPHSLRGTLLDTETLH
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtcattttttaaccacctcagacagtgccatgaccaagaagctctatatcgaa
acccacggttgccagatgaacgagtacgacagctcgcgcatggtcgacctgctgggcgag
catcaggctctggaggttacggaaaagcccgaagaagccgacgtgatcctgctcaatacc
tgctcgatccgcgagaaggcgcaggacaaggtgttttcccagctgggccgctggcgcgag
ttgaagcaggccaacccggatctggtgatcggtgtcggcggctgcgtggccagccaggaa
ggcgcggcgattcgcgaccgcgcaccctatgtcgacgtggtgttcggcccgcagaccctg
caccgcctgccggaaatgatcgacgccgcgcgcgtgaccaagactgcccaggtggacatc
agcttccccgaaatcgagaaattcgaccgcctgcccgagccgcgcgtcgacggccccagc
gccttcgtctcagtgatggaaggctgcagcaaatattgcaccttctgcgtggtgccctac
acccgtggcgaggaagtcagccgcccgctggtcgacgtactgatggaaatcacctccctg
accgagaagggtgtgaaggaagtcaccctgcttgggcagaacgtcaacggctaccgtggc
gaagcgccggacggtcatatcgccgatttcgccgaactgctgcatgccgtggcagccctc
gatggcgtcgagcgcatccgctacaccaccagccacccgctggagttctccgacgcgatc
atcgccgcccatgccgagattccgcagttggtgaaatacctgcacctgccggtgcagtct
ggctccgaccgcatcctcgcggcgatgaagcgcaaccacaccgcgctggaatacaagtcg
cgcatccgcaagctgcgcgccgccgtgccggacatcctgatcagctcggacttcatcgtt
ggcttccccggcgaaaccgagaaggatttcgagcagaccatgaagctgatcgaggacgtc
ggtttcgacttctccttctccttcatctacagctcgcgcccgggcaccccggccgccgac
ctggtcgacgacaccccggaagaagtgaagaagcagcgcctagccctgctgcagcaccgc
atcaaccagaacggtttcgagaacagccgacgcatggtcggtacggtgcagcgcatcctg
gtcagcgactattcgaagaaagacccgggcatgctccagggtcgcaccgagcagaaccgc
atcgtcaacttccgttgcgataacccgcgcctgatcggccagttcgtcgacgtgcacatc
gacgacgccctgccgcactcgctacgcggcaccctgctcgataccgagaccctccactaa
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