Ectopseudomonas mendocina NK-01: MDS_4110
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Entry
MDS_4110 CDS
T01473
Name
(GenBank) 3-methyladenine DNA glycosylase
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MDS_4110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmk03400
]
MDS_4110
Enzymes [BR:
pmk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
MDS_4110
DNA repair and recombination proteins [BR:
pmk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MDS_4110
Prokaryotic type
MDS_4110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
Motif
Other DBs
NCBI-ProteinID:
AEB60141
LinkDB
All DBs
Position
4514406..4515122
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AA seq
238 aa
AA seq
DB search
MPAEPTLSLPWPGARPLPDTFFDRDAQLLACELLGKVIRHRVGALWLSARIIETEAYYLV
DKGSHASLGYTEKRKALFADGGHIYMYYARGGDSLNFSAQGPGNAVLIKSGHPWIDAISG
ADSLAAMQRNNPDNLGRPRAPERLCAGQTLLCKALGLKVKDWDARRFDLQRLFVEDVGEQ
PHSIIQCARLGIPQGRDEHLPYRFVDALYARHCTRNPLRRGQVEGRDYRLLSVSGAER
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgaacccacccttagtttgccctggcccggcgccaggccattgcctgacacc
ttcttcgaccgcgacgctcagttgctcgcctgcgagcttctcggcaaggtcatccgccat
cgcgtcggtgcactgtggctgagcgcaaggatcatcgagaccgaggcctactacctggtg
gacaagggcagccatgcctcgctcggctacaccgagaagcgcaaggcgctgtttgccgat
ggcgggcacatctatatgtactacgcacgcggcggcgactcgttgaacttcagcgctcaa
gggcctggcaacgccgtactgatcaagtccggacatccctggatcgacgccatcagcggc
gccgactcgctcgccgcgatgcagcgcaacaatcccgacaatctcggccgaccacgtgcg
cctgagcgtttgtgcgcagggcaaaccctgctgtgcaaggcactcggcttgaaggtaaag
gactgggatgcgcgccgcttcgatctgcaacgattgttcgtcgaggatgttggcgagcag
cctcactcgatcatccagtgcgcgcgccttggcattccccaggggcgcgacgaacacctg
ccatatcgtttcgtcgacgcgctgtacgctcgccattgcacgcgcaaccctttgcgtcgt
ggacaggtcgaaggccgtgactatcgattgttgagcgtttcaggagcagaacgatga
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