Ectopseudomonas mendocina NK-01: MDS_4229
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Entry
MDS_4229 CDS
T01473
Name
(GenBank) TonB-dependent receptor, plug
KO
K16092
vitamin B12 transporter
Organism
pmk
Ectopseudomonas mendocina NK-01
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmk02000
]
MDS_4229
Transporters [BR:
pmk02000
]
Other transporters
Pores ion channels [TC:
1
]
MDS_4229
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AEB60260
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Position
4644806..4646659
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AA seq
617 aa
AA seq
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MKLSRLTLAVTLMPGLALATEPYVTEPLVVTSGRQAEPQAQATAATTVFERSDIERLQVR
SVPQLLSRVPGVQIGSSGGVISYSVRGTSTAQTLVLIDGQRVASASSGIARLDYLNIDNV
ERLEVTRGPRSSLYGADTIGGVIQIFTRRGEAGLHPQVRLAIGSHQTFQRSVALTGGNDR
TTFALGGSLDESSGWDRTSDNVGADSDHDALRNKAVHLNLDHRFSDDWKAGLNLNDQRGD
SEYDDAYNFVPGQPHDEFRLSSYSGYLDGRLTDTWSSRIELGRSFDRNKALGAADDWNNG
TLKTTRNSASWINRLQLNAANQLTLGADWYEDRVDGSTVFAENERANRAVFAQHSFKGEH
FGTELGLRHDDNQVYGNQTSWNAALSLPMGDSQSWIASYGEGFRAPTFSDLYYPGSGNPN
LKAETSKTYELQWRADFSGTHLTASLYRTDIDDMIAWDSSANRPENIAKARVNGFEASVA
RNVLDWQVQLGVSLIDPRDRDNGHTLPYRARRALSVDIDRQFGAFGVGGSWRAVSQRYDD
SANTRQLSGYGVLDLRTSWQSSPELRWDLKLDNALDRGYTQGNYLRPTNPLDFTGEPHPY
REAGRTALLAVTWTPQL
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgtcccgtctcaccctggccgtcacccttatgccaggcctcgccctggctacc
gaaccctacgtcaccgaaccgctggtcgttacttccgggcgccaggccgagccgcaagcc
caggccactgccgcaaccacagtgttcgagcggagcgatatcgagcgcctgcaggttcgc
agcgtgccccagttgctcagccgagtgcctggcgtgcagattggcagctccgggggggtg
atttcctactcggtgcgcggtaccagcaccgcgcagaccctggtacttatcgatggccag
cgcgttgcatccgccagtagcggcatcgctcgcctcgattacctgaacatcgacaacgtc
gaacgcctggaggtgacgcgcggcccccgctcatccctctatggagccgacaccattggc
ggtgtgatccagattttcacccgccgtggcgaagcgggcctgcatccgcaagtgcgcctg
gcaatcggcagccaccagaccttccagcgcagcgtggcactgaccggaggcaatgaccgc
actacctttgccctcggtggcagccttgacgaaagcagcggctgggatcgcaccagcgac
aacgtcggtgccgacagcgatcacgacgcgctgcgcaacaaggccgtacacctgaatctg
gatcatcgtttcagcgatgactggaaagccgggctgaacctgaacgatcaacgcggcgac
agtgagtacgacgacgcttacaacttcgtccccggacaacctcacgatgagttccgcctg
agcagctacagcggatacctggatggcaggcttaccgacacctggagcagccgtatcgaa
ctgggccgcagtttcgaccgcaacaaggccctgggcgccgcagacgactggaacaatggc
acgctgaaaaccactcgcaactctgcaagctggatcaatcgcctgcaactgaacgcggcc
aaccaactgaccctcggtgccgactggtacgaggacagggttgatggcagcaccgtgttt
gcagaaaacgagcgtgctaatcgtgccgtcttcgctcaacacagcttcaagggcgaacac
tttggcaccgaactgggccttcgccacgacgacaaccaggtctacggaaaccagaccagc
tggaacgcggccctcagtctgcccatgggcgacagtcagagctggatcgccagttacggt
gagggtttccgcgcccccaccttcagcgatctctactatcccggctcaggcaacccgaat
ctaaaggccgagacgtcgaaaacctacgagttgcaatggcgcgccgacttctccggcacg
cacctgacagcctcgctgtaccgtaccgacatcgacgacatgatcgcctgggatagcagc
gccaatcggccggagaatattgccaaggcgcgcgtcaatggcttcgaggccagcgttgcc
cgcaatgtactggactggcaggttcagctcggggtgagcctgatcgatccgcgcgaccgc
gacaacggccacacacttccttaccgagcgcgccgcgccctcagcgtagatatcgaccgc
cagtttggcgccttcggtgtcggcggctcatggcgcgcggttagccaacgctacgacgac
tcggccaatacccgccaactctccggttatggtgtactcgacttgcgcaccagttggcag
agttcacctgaactgcgctgggatctgaagctggataacgcactcgatcgtggttacacg
cagggtaactaccttcgtccgaccaatcctctggatttcacaggcgaaccacatccctat
cgcgaggctggtcgcaccgcactgctggcggtgacctggacaccacaactctag
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