Ectopseudomonas mendocina NK-01: MDS_4230
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Entry
MDS_4230 CDS
T01473
Name
(GenBank) periplasmic binding protein
KO
K06858
vitamin B12 transport system substrate-binding protein
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
MDS_4230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmk02000
]
MDS_4230
Transporters [BR:
pmk02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Vitamin B12 transporter
MDS_4230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_2
Motif
Other DBs
NCBI-ProteinID:
AEB60261
LinkDB
All DBs
Position
complement(4646772..4647566)
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AA seq
264 aa
AA seq
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MRALLFALCLLTLPLSAAERVISLAPSLSEIMLDLNAADLLIGVLDGDERPTALAHLPTV
GRYGQLEFERLLQLAPDLILIAPGSVPPAQQAQLRGLGIDLLIVEPQRLDQLGDAFVGIG
KRIGRPERGEQLASEFQDALDALRQRYRRKQPLSVFYQVWHQPLYTIGGQQLIGDALQVC
GARNLFDDLPQPAPQVSVEAVLARDPDVILGGSNAELTTWQAWPQLHAVRRGRVWAVPDK
GLERPSRQMLGAIERLCELMAGAR
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgctttgctgttcgccctctgcctgctgactttgccgctgtcggccgccgagcgg
gtgatcagcctggcaccctcgctcagcgaaatcatgctcgatctgaatgcggccgacctg
ctgatcggtgtgctcgacggagacgagcgtcccaccgctctggcgcatctacccaccgtt
gggcgttatggacagctggaattcgaacgcctactgcagctggcgccggatctgatcctg
atcgcgccaggcagcgtgccgcccgcgcaacaggcgcagttgcgcgggctaggcatcgat
cttttgatcgtcgagccgcaacgcctcgaccaactcggtgatgcgttcgtaggcattggc
aagcgaattggtcggccggagcggggtgagcagctggcttccgagtttcaggacgccctg
gatgcgttgcgtcagcgctaccggcgcaaacagcccctgtcggtgttctatcaggtctgg
caccagccgctctacaccatcggtggccagcaactgatcggtgatgccctgcaggtgtgc
ggtgcacgcaatctgttcgacgacctgccgcagccggcgcctcaggtcagcgtcgaggca
gtgctggcgcgtgatccggatgtcattctcggcggtagcaatgccgaactgacgacctgg
caagcctggccgcagttgcatgcggtgcgccgggggcgggtgtgggcggtgccggacaag
ggcctggaaaggcccagccggcagatgctgggcgccatcgagcggttgtgcgagctgatg
gcaggagcgcggtag
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