Ectopseudomonas mendocina NK-01: MDS_4340
Help
Entry
MDS_4340 CDS
T01473
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MDS_4340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pmk02000
]
MDS_4340
Transporters [BR:
pmk02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
MDS_4340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
AEB60371
LinkDB
All DBs
Position
complement(4750222..4751253)
Genome browser
AA seq
343 aa
AA seq
DB search
MTKSLKLAALALGVSCAMPALAVDLTAVSFGGANKAAQVKAFYEPFEKETGNKVLGGEYN
GEMAKVKAMVDTRSVSWDLVEVESPELARGCDEGLFEELDPAQFGDEANFIEGAIQPCGV
GFFVWSTVLAYNADKLSAAPTSWADFWDVAKFPGKRGLRKGAKYTLEFALMADGVPVKDV
YKVLATKEGQDRAFKKLDELKPNIQWWEAGAQPPQYLASGDVVMSSAYNGRIAAVQGESN
LQVVWNGGIYDFDSWAIPRGAKNAELAKEFIAYSVKPEAQKTYSENIAYGPANKQAIDLL
APERLNLMPTTPENIANQVAIDVTFWADYGEQLEQRFNAWAAR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaatccctgaagctggcggcattggccctgggcgttagctgcgccatgccggca
ctggcggtagacctgacggcggtatccttcggcggcgcgaacaaggcggcgcaggtcaag
gcgttctacgaacccttcgagaaggaaaccggcaacaaggtgctgggcggtgaatacaac
ggtgaaatggccaaggtcaaagccatggtcgacacccgcagcgtgagttgggatctggtg
gaggtggagtcgccggaactggctcgcggttgcgacgaaggcctgttcgaagagctcgac
ccggcgcagttcggcgatgaggccaacttcatcgaaggcgccatccagccctgcggtgtc
ggcttcttcgtctggtccaccgtcctggcctataacgccgacaaactcagcgcggccccg
actagttgggccgacttctgggacgtagcgaaattccccggcaagcgtggcctgcgcaag
ggcgccaagtacaccctggagttcgccctgatggctgacggcgtgccggtcaaggatgtg
tacaaggtattggccaccaaggaaggccaggaccgcgcgttcaagaaactcgacgagctc
aaacccaacatccagtggtgggaagcaggcgcccagccgccgcagtacctggcctccggt
gatgtggtgatgagctcggcctacaacggccgcatcgctgccgtgcagggtgagagcaac
ctgcaggtggtgtggaacggcggcatctacgacttcgactcctgggccatcccgcgtggc
gccaagaacgccgaactggccaaggagttcatcgcctattcggtcaagcccgaagcgcag
aagacctactcggaaaatatcgcctacggtccggccaacaagcaggccatcgatctgttg
gcgccggagcgtctcaacctgatgccgaccacgccggaaaacatcgccaaccaggtggcc
atcgacgtgaccttctgggctgactacggcgagcagctggaacagcgcttcaacgcctgg
gccgcgcgctaa
DBGET
integrated database retrieval system
