Ectopseudomonas mendocina NK-01: MDS_4418
Help
Entry
MDS_4418 CDS
T01473
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk03030
DNA replication
pmk03430
Mismatch repair
pmk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MDS_4418
03430 Mismatch repair
MDS_4418
03440 Homologous recombination
MDS_4418
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmk03032
]
MDS_4418
03400 DNA repair and recombination proteins [BR:
pmk03400
]
MDS_4418
Enzymes [BR:
pmk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MDS_4418
DNA replication proteins [BR:
pmk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MDS_4418
DNA repair and recombination proteins [BR:
pmk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MDS_4418
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DTX3L_a-b
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AEB60449
LinkDB
All DBs
Position
4843124..4843825
Genome browser
AA seq
233 aa
AA seq
DB search
MSRFTWFTGRGPALTQQQLQRRQALSAPAAFDERPLHEQRLVVLDLETTGLNMRRDQVLA
IGAVVIDHGAIDFAEQFECTLHQPDHQASASTLIHGIAPSEVARGVDPAEGLLDFMEFVG
SSPLLAFHAGFDQRMLARALRQSLGYRLQHSFFDVAEIAPLLCPQARIRQGGLDDWVAEF
GLQVHQRHNASADALVTAELALMLFSKARRQGIDSLCELERQLASRRRRQHAM
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggttcacctggttcaccggccgcggcccggccctgacccagcagcagttgcaa
cgccgccaggccttgagcgcaccggcagcattcgacgagcgcccactgcatgagcagcgc
ttggtcgtgctcgatctggaaaccaccggtttgaacatgcgccgcgatcaggtgctggcc
atcggcgcggtggtgatcgaccacggtgccatcgacttcgccgaacagttcgaatgcacc
ctgcaccaacccgatcaccaggccagcgccagcaccctgatccacggtattgcccccagc
gaagtcgctcgcggcgtcgaccccgccgaagggctgctggacttcatggagttcgtcggc
agcagcccgctgctggcgttccacgccggtttcgatcagcgcatgctggcccgtgcactg
cggcagagcctgggttatcgcctgcaacacagtttcttcgacgttgccgagattgccccg
ctgctgtgcccgcaagcacgcattcgccaaggcgggctcgacgactgggtcgccgaattc
ggcctgcaggtgcaccaacgtcacaacgccagtgccgatgcactggtcaccgccgaactg
gcgctgatgttgttcagcaaggcgcgccggcagggcatcgacagcctctgcgagctggag
cgccagctggccagccgtcgcaggcgccagcacgccatgtag
DBGET
integrated database retrieval system
