Ectopseudomonas mendocina NK-01: MDS_4451
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Entry
MDS_4451 CDS
T01473
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk00260
Glycine, serine and threonine metabolism
pmk00460
Cyanoamino acid metabolism
pmk00630
Glyoxylate and dicarboxylate metabolism
pmk00670
One carbon pool by folate
pmk00680
Methane metabolism
pmk01100
Metabolic pathways
pmk01110
Biosynthesis of secondary metabolites
pmk01120
Microbial metabolism in diverse environments
pmk01200
Carbon metabolism
pmk01230
Biosynthesis of amino acids
pmk01240
Biosynthesis of cofactors
pmk04981
Folate transport and metabolism
Module
pmk_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MDS_4451
09102 Energy metabolism
00680 Methane metabolism
MDS_4451
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MDS_4451
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
MDS_4451
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
MDS_4451
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
MDS_4451
Enzymes [BR:
pmk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
MDS_4451
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AEB60482
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Position
complement(4882545..4883798)
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AA seq
417 aa
AA seq
DB search
MFSKQDQIQGYDDELLAAINQEERRQEEHIELIASENYCSQRVMEAQGSGLTNKYAEGYP
GKRYYGGCEYVDKVEQLAIDRAKQLFGADFANVQPHSGSSANAAVYLALLNAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGLNPATGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPNPIPFADVVTTTTHKTLRGPRGGLI
LAKANEEIEKKINSAVFPGAQGGPLMHVIAAKAVCFKEAMEPEFKAYQQQVIDNAQAMAK
VFVERGFEVVSGGTDNHLFLLSLIKQGLTGKEADAALGRAGITVNKNAVPNDPQSPFVTS
GIRIGTPAVTTRGFKVAQCQALAGWICDILDHLGDADVEAQVAKLVAGLCADYPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcaagatcagattcagggttacgacgacgagttgctcgcggcgatcaat
caggaagaacgccgtcaggaagagcacatcgagctgatcgcctcggaaaactactgcagc
cagcgcgtgatggaagcgcaaggcagtggcctgaccaacaagtacgccgaaggctacccg
ggcaagcgctactacggtggctgcgagtatgtcgacaaggtcgagcaactcgccatcgac
cgtgccaagcaactgttcggtgcggacttcgccaacgttcagccgcactccggctcgtcc
gccaacgccgctgtctacctggcgctactcaatgccggtgacaccattctcggcatgagc
ctggcccacggtggccacctgacccacggtgccaaggtgtcgtcctcgggcaagctgtac
aacgccgtgcagtatggtctgaaccctgccaccggcctgatcgactacgacgaggtcgag
cgtctggccgtggagcacaagccgaagatgatcgttgccggcttctccgcctattccaag
accctggatttcccgcgcttccgcgccatcgccgacaaggtcggcgcgctgctgttcgtc
gacatggcgcacgtggcgggtctggtcgccgctggcctgtatccgaacccgattcccttc
gccgatgtggtcaccaccactacccacaagaccctgcgcggcccgcgtggcggtctgatc
ctggccaaggccaatgaagagatcgagaagaagatcaactccgccgtattcccgggtgcc
cagggcggcccgctgatgcacgtgatcgccgccaaggcggtgtgcttcaaggaagccatg
gagcctgagttcaaggcctatcagcagcaggtcatcgacaacgcccaggccatggccaag
gtcttcgtcgagcgcggcttcgaagtggtctccggtggcaccgacaatcacctgttcctg
ctcagcctgatcaagcagggcctgaccggcaaggaagccgatgctgcccttggccgcgcc
ggcatcaccgtgaacaagaacgccgtgccgaacgacccgcaatcgccgttcgtgacctcg
ggcatccgcatcggtaccccggccgtcaccacccgtggtttcaaggtcgcccagtgtcag
gcgctggcgggctggatctgcgacatcctcgaccacctcggcgatgccgatgtcgaggcg
caggtggccaagctggtggccgggctgtgcgcggattacccggtctatcgctaa
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