Ectopseudomonas mendocina NK-01: MDS_4520
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Entry
MDS_4520 CDS
T01473
Name
(GenBank) SAM-dependent methyltransferase
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
pmk
Ectopseudomonas mendocina NK-01
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmk03009
]
MDS_4520
Enzymes [BR:
pmk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
MDS_4520
Ribosome biogenesis [BR:
pmk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MDS_4520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Methyltransf_31
Cons_hypoth95
Methyltransf_15
MTS
Methyltransf_25
Methyltr_RsmB-F
FtsJ
TRM5-TYW2_MTfase
UPF0020
Methyltransf_11
PrmA
Anamorsin_N
Spermine_synth
Methyltransf_24
TRM
MT-A70
Motif
Other DBs
NCBI-ProteinID:
AEB60551
LinkDB
All DBs
Position
4953414..4954613
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AA seq
399 aa
AA seq
DB search
MSSLPSLRLKANADRRLRAGHLWVYSNEIDVAATPLHGFAAGDQAILEAVGGKPLGIVAM
SPNNLICARLLSRDVKHVLDKSLLVHRLNVALSLRERLFDKPCYRLVYGDSDLLPGLVID
RFFDILVVQLASATMEAHKDDVLAALIQVLKPSGILFKNDSSARDAEGLERYVATAYGEV
PEWVALEENGVKFEAPVIEGQKTGWFYDHRMNRARLAPYVKGKRVLDLFSYIGGWGVQAA
AFGASEVFCVDASGFALDGVERNANLNGFAEKVTCVEGDVFAALRELKSAEERFDVVIAD
PPAFIKRKKDIKNGEAAYRRLNETAMRLLNKDGILVSASCSMHLDEDNLQNILLTSARHL
DRNIQLLERGAQGPDHPVHPAINETRYIKSLTVRLLPNS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccctgcccagtctgcgcctgaaagccaacgccgaccgacgcctgcgcgccggc
catctgtgggtctacagcaacgagatcgatgtcgccgccacaccgctgcatggtttcgct
gctggcgaccaggccattctggaagcggtcggcggcaagccgctgggcatcgttgccatg
agtccgaacaacctgatctgcgcccgcctgctgtcgcgcgacgtcaagcacgtgctggac
aaatccctgctggtgcaccgcctcaacgtggccctgagtctgcgtgagcgtctgttcgac
aagccctgctaccgcctggtctacggcgactcggacctgctgccgggtctggtgatcgac
cgattcttcgacatcctcgtggtacagctggcctcggccaccatggaagcgcacaaggac
gacgtgctcgccgcgcttatccaggtgctcaagcccagcggcatcctgttcaagaacgac
tccagcgcccgcgatgccgagggcctggagcgctatgtggcgactgcctatggggaagta
ccggaatgggtcgcgctggaagagaacggcgtgaaattcgaagcaccggtgatcgaaggg
cagaaaaccggctggttctatgaccaccgcatgaaccgcgcgcgcctggcgccctacgtg
aaaggcaagcgcgtgctcgacctgttcagctacatcggcggctggggcgtgcaggcggcg
gcgttcggggccagcgaagtattctgcgtagacgcctccggcttcgccctcgatggtgtc
gagcgcaacgccaacctcaacggtttcgccgagaaggtcacctgtgtcgaaggcgacgta
ttcgccgcgctgcgcgaactgaaatccgcggaagagcgcttcgacgtggtgatcgccgac
ccgcccgccttcatcaagcgcaagaaggacatcaagaacggcgaagctgcctatcgtcgt
ctcaacgaaaccgcgatgcgcctgctgaacaaggacggcatcctggtcagcgccagttgc
tccatgcatctggacgaagacaacctgcagaacatcctgctgaccagcgcccgccatctg
gaccgcaacatccagttgctcgagcgcggcgcccagggcccggatcacccggtacacccg
gccatcaatgagacccgctacatcaagagcctgaccgtacgcctgctgcccaacagctga
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