KEGG   Ectopseudomonas mendocina NK-01: MDS_4606
Entry
MDS_4606          CDS       T01473                                 
Name
(GenBank) two component, sigma54 specific, fis family transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pmk  Ectopseudomonas mendocina NK-01
Pathway
pmk02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pmk00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    MDS_4606
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pmk02022]
    MDS_4606
Two-component system [BR:pmk02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   MDS_4606
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 AAA_5 HTH_50 AAA_2 FleQ HTH_8 AAA
Other DBs
NCBI-ProteinID: AEB60637
LinkDB
Position
5041853..5043238
AA seq 461 aa
MTSDSAIDSRIQVLLIDDDAHLRQALSQTLDLAGLKVLSLGDAQGLAARIPVGWPGVVVS
DIRMPGIDGLQLLQQLRERDAELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFANDDLLD
SVRRALELRRLVLDNRSLRMALNDRQQLSSRLVGQSPAMQRLREQIGALAGIATDVLILG
ETGAGKEVVARALHDLSSRRDGPFVAINAGALAESVVESELFGHEAGAFTGAQKRRIGKF
EFANGGTLFLDEIESMSLDVQVKLLRLLQERVVERLGGNQLIPLDIRVIAATKEDLRQAA
DAGRFRADLYYRLNVAPLSIPPLRERGEDALLLFQHFAEGAAARHALAPRELQPGQRALL
LRHPWPGNVRELQNAAERFALGLELALDSNAPNLPPVNGGLSEQVEAFERALIAAELSRP
HGSLRSLAEALGVPRKTLHDKLRKHGLNFSGAGGSSPEDFD
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgaccagcgacagcgccatcgacagccgcattcaggtattgctgatcgacgacgacgcc
cacctgcgccaggcactcagccagacgctcgatctggccgggctcaaggtcctcagcctg
ggtgatgcccaaggcctggctgcgcgtatcccggtcggctggccgggtgtggtggtcagc
gatatccgcatgccgggtatcgacggcctgcaactgctgcaacagcttcgcgaacgcgat
gccgagttgccggtgctgctgattaccggtcacggtgacgtgccactggcagtacaggcg
atgcgtgccggcgcctacgatttcctggaaaagcccttcgccaacgacgacctgctcgac
agcgtgcgccgtgccctggaactgcgccgcctggtactggacaaccgcagcctgcgcatg
gcgctcaatgaccgccagcagctgtccagtcgcctggtgggccagtcgcctgccatgcag
cgcctgcgcgaacagatcggtgccctcgccggcatcgccaccgatgtgctgattcttggc
gagaccggcgccggcaaggaggtggtcgcccgcgccctgcacgatctgtccagccgccgc
gacggccccttcgtcgccatcaacgccggcgcgctggccgaatcggtggtggaaagcgag
ttgttcggccacgaggccggcgccttcaccggtgcgcagaaacggcgcatcggcaagttc
gagttcgccaatggcggcaccctgttcctcgacgagatcgagagcatgagcctggacgtg
caggtcaaattgctgcgtctgctgcaggagcgcgtggtcgaacgcctcggtggcaatcag
ctgatcccgctggacatccgtgtgatcgccgcgaccaaggaagacctgcgccaggctgcc
gatgccgggcgtttccgcgctgacctttactaccggctcaacgtcgcaccgctgtccatc
ccgccgctgcgcgagcgcggcgaggacgccttgctgctgttccagcatttcgccgaaggg
gcggccgcccgccacgccctggcgccacgtgaactgcaaccagggcagcgtgcgctgctg
ctgcgtcatccatggccaggcaacgtgcgcgaactgcagaacgccgccgaacgtttcgcc
ctgggcctggaactggcgctggacagcaacgcaccgaacctgccgccggtcaacggcggg
ctcagcgagcaggtcgaagccttcgagcgcgcgctgatcgccgccgagttgagccgtccg
cacggctcgctacgcagcctggccgaagcgctgggcgtaccgcgcaagaccctgcacgac
aagctgcgcaaacatgggctgaatttctccggcgctggcggaagctcgccagaggacttc
gactga

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