Ectopseudomonas mendocina NK-01: MDS_4822
Help
Entry
MDS_4822 CDS
T01473
Name
(GenBank) pyruvate carboxylase subunit B
KO
K01960
pyruvate carboxylase subunit B [EC:
6.4.1.1
]
Organism
pmk
Ectopseudomonas mendocina NK-01
Pathway
pmk00020
Citrate cycle (TCA cycle)
pmk00620
Pyruvate metabolism
pmk00720
Other carbon fixation pathways
pmk01100
Metabolic pathways
pmk01120
Microbial metabolism in diverse environments
pmk01200
Carbon metabolism
pmk01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
MDS_4822
00620 Pyruvate metabolism
MDS_4822
09102 Energy metabolism
00720 Other carbon fixation pathways
MDS_4822
Enzymes [BR:
pmk01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
MDS_4822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PYC_OADA
HMGL-like
Biotin_lipoyl
Biotin_lipoyl_2
RnfC_N
NQRA_N
HlyD_D23
GCV_H
HlyD_3
Motif
Other DBs
NCBI-ProteinID:
AEB60853
LinkDB
All DBs
Position
complement(5279906..5281717)
Genome browser
AA seq
603 aa
AA seq
DB search
MSKKITVTDTVLRDAHQSLLATRMRTEDMLPICDKLDRVGYWSLEVWGGATFDSCVRFLK
EDPWERLRQLKAALPNTRLQMLLRGQNLLGYRHYSDDVVKAFVAKAAVNGIDVFRIFDAM
NDVRNLRVAIEAVKAAGKHAQGTIAYTTSPVHTNEAFVAQAKAMQAMGIDSIAIKDMAGL
LTPYATFELVKALKSEVDLPVFIHSHDTAGLGAMCQLKAIEAGADHIDTAISSLAWGTSH
PGTESMVAALKGSEYDTGLDLELIQEIGMYFHAVRKKYHQFESEFTGVDTRVQVNQVPGG
MISNLANQLKEQGALNRMNEVLEEIPRVRADLGFPPLVTPTSQIVGTQAFFNVLAGERYK
TITNEVKLYLQGRYGKAPGKVDEQLRKQAIGSEEVIDVRPADLLKPELARLREEIGSLAK
SEEDVLTFAMFPDIGRKFLEERAAGTLKPEELLPMPNGQGKAAPVGGEGVPTEFVVDVHG
ESYRVDITGVGVKGDGKRHFYLSIDGMPEEVVFEPLNDFVAGAGGKRKQAAAPGDVSTTM
PGNIVDVLVKEGDTVKAGQAVLITEAMKMETEVQAPIAGTVKAVHVAKGDRVNPGEVLVE
IEG
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaagatcaccgttaccgataccgtcctgcgcgatgctcaccagtcgctgctg
gccacgcgcatgcgcaccgaggacatgctgccgatctgcgacaagctcgaccgcgtcggc
tactggtcgctggaagtctggggtggcgccaccttcgattcgtgcgtgcgcttcctcaag
gaagacccgtgggagcgcctgcgccagctcaaggccgcgctgcccaatacccgcctgcag
atgctcctgcgcgggcagaacctgctcggctatcgccattacagcgatgacgtggtcaag
gcgttcgtggccaaggcagcggtcaacggcatcgacgtgttccgcatcttcgatgcgatg
aacgacgtgcgtaacctgcgcgtggccatcgaggcggtcaaggctgccggcaagcatgcc
cagggcaccatcgcctacaccaccagcccggtgcacaccaacgaggccttcgtcgcccag
gccaaggccatgcaggcgatgggcatcgactccatcgccatcaaggacatggccggcctg
ctcacgccgtatgccaccttcgaactggtcaaggcgctgaagagcgaagtcgacctgccg
gtgttcatccacagccatgacaccgccggcctaggcgccatgtgccagctcaaggccatt
gaagcgggcgccgaccatatcgacaccgccatctccagcctggcctggggcaccagccat
ccgggcaccgagtcgatggtcgccgcgctcaagggtagcgaatacgacaccggcctggat
ctggagctgatccaggaaatcggcatgtatttccatgccgtacgcaagaagtaccaccag
ttcgagagcgagttcaccggcgtggatacccgcgtgcaggtcaaccaggtgccgggcggg
atgatttccaacctggccaaccagctcaaggagcagggtgcgctgaaccgcatgaacgaa
gtgctggaagagattccgcgcgtgcgcgccgacctcggcttcccgccgctggtgacgccg
acctcgcagatcgtcggtacccaggcgttcttcaacgtgctggccggcgagcgctacaag
accatcaccaacgaagtgaagctgtacttgcagggccgctacggcaaggcgccgggcaag
gtcgacgagcaactgcgcaagcaggccatcggtagcgaggaagtgatcgacgtgcgcccg
gccgacctgctcaagcccgagctggcacgcctgcgtgaagagatcggcagcctggccaag
tccgaagaagacgtgctgaccttcgccatgtttcccgatatcggccgcaagttcctcgaa
gagcgcgcggccggcaccctcaaaccggaagagctgctacccatgccgaacggccagggc
aaggcggcgccggtgggcggtgaaggcgtgccgaccgaattcgtggtcgacgtgcacggc
gaaagctaccgcgtggacatcaccggtgtcggcgtcaagggcgacggcaagcgccacttc
tacctgtccatcgacggcatgccggaagaggtggtgttcgagccgctcaacgatttcgtt
gcaggcgcaggtggcaagcgcaagcaggccgctgcaccgggcgatgtatccaccaccatg
ccaggcaacatcgtcgatgtactggtcaaggaaggtgacacggtcaaggcgggtcaggcg
gtcctgatcaccgaagcgatgaagatggaaaccgaagtgcaggcgccgattgccggcacc
gtcaaggccgttcacgtggccaagggcgaccgtgtcaatccgggcgaagtactggtggaa
atcgaaggttaa
DBGET
integrated database retrieval system