Ectopseudomonas mendocina NK-01: MDS_4880
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Entry
MDS_4880 CDS
T01473
Name
(GenBank) choline/carnitine/betaine transporter
KO
K03451
betaine/carnitine transporter, BCCT family
Organism
pmk
Ectopseudomonas mendocina NK-01
Brite
KEGG Orthology (KO) [BR:
pmk00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
MDS_4880
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
BCCT
DUF805
Motif
Other DBs
NCBI-ProteinID:
AEB60911
LinkDB
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Position
complement(5343186..5344853)
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AA seq
555 aa
AA seq
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MGNVPSHDTTPPSAAENNEGIPAPTGAANLIDTDYVIGQDNIKGQFVFALDIHGKVFTIS
ALVAVIFVILALALQNQIEPLFSGLRDWLTHHMAWFFIGAANIFVLLCLGLIVSPLGKVR
IGGKEATPDYTYLGWFSMLFAAGMGIGLMFYGVSEPMSHYSAAMGGITVGEDGVRTDWAP
LGGAAGNAEEAVRLGMAATIFHWGLHPWAIYAIVALALALFSFNKGLPLSIRSIFYPILG
ERVWGWPGHVVDILAVFATLFGLVTSLGLGAEQAAAGLEYLFAIPASDTTKVLLIVAITL
IALASVVAGLDKGVKRLSEINMGLALILLLFIIIAGPTLVIFTDFFKNLGAYLQYLPALA
NPIGREDANFSQGWTAFYWAWWISWSPFVGMFIARVSRGRSVREFLVAVLLVPSLVSVLW
MTAFGGTAINQLLVDGFTGAQDAGLELKLFSMLGEMPLTAITSFIGIVLVVVFFITSSDS
GSLVIDTITAGGKVNAPVPQRVFWASIEGVIAIALLLGGGLVALQAMAVSTGLPFTIVLL
VGCISIVKGLMSEPR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgtcccttcgcatgacacgaccccgccatccgcagcggaaaacaacgaaggc
atcccggccccaacgggcgcggccaatctgatcgacaccgattacgtcatcggtcaggat
aacatcaaagggcagttcgtcttcgccctcgacattcacggcaaggtcttcaccatctcc
gcgctggtcgcggtgattttcgtgatcctcgccctggctctgcagaaccagatcgagccg
ctgttcagcggcctgcgcgactggctcacgcatcacatggcctggttctttatcggcgcc
gccaacattttcgtcctgctctgccttggcctgatcgtctcgccgctgggcaaggtgcgc
atcggcggcaaggaagccacgcccgactacacctatctgggctggttctccatgctgttc
gctgccggtatgggcatcggcctgatgttctacggcgtgtccgaaccgatgtcgcactac
agtgcggcgatgggcggcatcacggtcggcgaagacggcgtgcgtaccgactgggcgccg
ctcggcggtgcggccggtaatgccgaggaggccgtgcgcctgggcatggccgcgaccatt
ttccactggggtctgcacccctgggcgatctacgccatcgtcgcgctggcgctggcgctg
ttctccttcaacaagggcctgccgctgtcgatccgctcgatcttctacccgatcctcggt
gagcgcgtgtggggctggccgggccatgtggtcgacatcctcgcggtgttcgccacgctg
tttggcctggtcacttcgctggggctgggggccgaacaggcagcagcagggctcgagtac
ctgttcgccattccggcctcggataccaccaaggtgttgctgatcgtcgccatcaccctg
atcgccctggcttcggtagtcgccggtctcgacaaaggggtcaagcgcctgtccgagatc
aacatgggcctggctctgatcctgttgttgttcatcatcatcgccgggccgacgctggtg
atcttcaccgacttcttcaagaacctcggcgcctacctgcagtatctgccggcactggcc
aacccgatcggccgtgaggatgccaatttcagccagggctggaccgcgttctactgggcc
tggtggatcagctggtcgccgttcgtgggcatgttcatcgcccgcgtcagccgtggccgc
agcgtgcgtgagtttctcgtcgccgtgctgctggtgccgtcgctggtatcggtgctgtgg
atgaccgccttcggcggcaccgccatcaaccagttgctggtcgatggttttaccggtgcg
caggatgccggcctggagctgaagttgttcagcatgctcggtgaaatgccgctgaccgcc
atcacttcgttcatcggcatcgtgctggtggtggtgttcttcatcacctcgtcggactcg
ggctccctggtgatcgacaccatcaccgctggcggcaaggtcaatgcgccggtaccgcaa
cgtgtgttctgggccagtatcgagggcgtgatcgccattgccctgttgctcggcggtggc
ctggttgcgttgcaggcgatggccgtatccaccggcctgccgttcaccatcgtgttgctg
gtcggctgcatttccatcgtcaaggggctgatgagcgagccgcgttga
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