Candidatus Phytoplasma mali: ATP_00075
Help
Entry
ATP_00075 CDS
T00729
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pml
Candidatus Phytoplasma mali
Brite
KEGG Orthology (KO) [BR:
pml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pml03032
]
ATP_00075 (topA)
03400 DNA repair and recombination proteins [BR:
pml03400
]
ATP_00075 (topA)
Enzymes [BR:
pml01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ATP_00075 (topA)
DNA replication proteins [BR:
pml03032
]
Prokaryotic type
DNA Topoisomerases
ATP_00075 (topA)
DNA repair and recombination proteins [BR:
pml03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ATP_00075 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
Toprim_4
BBS2_N
RNase_HII
Motif
Other DBs
NCBI-ProteinID:
CAP18262
UniProt:
B3R098
LinkDB
All DBs
Position
complement(89985..91784)
Genome browser
AA seq
599 aa
AA seq
DB search
MKKLIIVESPAKAKTIYNYLNKEFLVLSSKGHVTNLSFTGKDGLGVDIENDFKPNYKVIA
DKKKIVQELIQSSKGKEVFLATDPDREGESIAWHLAKILNLDPTSKNRIIFREMTKNFIV
DSVKNPQKINTMLVSSQETRRILDRIIGFKLSKLVKRFHSKSAGRVQSVALKLIVDLEIN
RNNFIPEEYYLIKVIFENFKVDLFINDSKKIKKEEVDEILKKIKGKSFMVKHIDKKTVYK
NPSIAFITSTLQQTAFNELNMTSALTMMIAQRLYEGEIKIEGERTGLITYMRTDSTRMSL
SFIENTQKFIKSNYGENYLGSYQQKKNVNSQDAHEAIRPTNINKTPESLKKYLKKDEYRI
YSLIYYRTLSSLMKYAIFENTKVFFQSVDYTFILEGLVRKFDGYQKVLNIDNKDKILSNF
SLKEVYYPKEFINEQCFTTPPTRFSEATLIKTLEKLNIGRPSTYSKIIKTLKDRFYVILE
NKRFVPNKQGILTKNILEKFFSDIINVKYTSQIEKQLDQIAIGKITQKNMLENFYCDFKN
LYDIADKKITKIVPKITDQKCSLCNKFLSIKKGRYGEFLGCSGFPKCKNIVNLKKYYQK
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattaattattgttgaatctcctgctaaagcgaaaactatttataattattta
aataaagaatttttagttttatcttctaaaggccatgttacaaatttatctttcactggt
aaagatggtttaggagttgatattgaaaatgattttaaacctaattataaagttattgct
gataaaaaaaaaattgttcaagaattaattcaatcttctaaaggtaaagaagtttttttg
gcaaccgatcctgatagagaaggcgaatcgattgcttggcatttagcaaaaattttaaat
ttagatcctacatctaaaaatagaattatttttagagaaatgactaaaaattttattgtt
gattcagtgaaaaatcctcaaaaaattaatacaatgcttgtatcatctcaagaaactaga
cggatattagatcgtattatcggatttaaattatctaaattagttaagcgtttccattcg
aaatctgctggtagagtacaatcagtagctttaaaattaattgtagatttagaaattaac
agaaataattttataccagaagaatattatttaattaaagttatttttgaaaattttaaa
gtagatttattcattaatgattccaaaaaaataaaaaaagaagaagttgatgaaatttta
aaaaaaattaaaggtaaatcttttatggttaagcatattgataaaaaaaccgtttataag
aatccttctattgcttttatcacttctactttgcaacaaactgcttttaatgaattgaat
atgacttcagcattaacaatgatgatagcacaaagactttatgaaggtgaaattaagatt
gaaggagaacgtacaggattaattacttatatgagaactgattctactaggatgtcttta
tcttttatagaaaatacacaaaaatttatcaaatctaattatggcgaaaattatttaggt
tcttatcaacaaaaaaaaaatgtaaattctcaagatgctcatgaagctattcgccccaca
aatattaataaaactcccgaaagtttaaagaaatatttaaaaaaagatgaataccgaatt
tattcattaatttattatagaacattgtcaagtttaatgaaatatgctatttttgaaaat
actaaagttttttttcaatctgttgattatacttttattttggaaggattagttagaaaa
tttgatggttatcaaaaagttttaaatattgataacaaagataaaattttatctaatttt
tctttaaaagaagtatactatcctaaagaatttattaatgagcaatgttttaccacccct
ccaacacgtttttctgaagctactttgattaaaactttggaaaaattaaatattggtaga
ccatcaacttattctaaaattattaaaactttaaaagatagattttatgtaattttagaa
aataaaagatttgttcctaataaacaagggattttaactaaaaatattttagaaaaattt
ttttctgacattattaatgttaaatatacatcacaaattgaaaaacaattagatcagata
gctataggtaaaattacccaaaaaaatatgttagaaaatttttattgcgattttaaaaat
ttatatgatattgctgataaaaaaataactaaaatagttcctaaaattacagatcaaaaa
tgctctttatgtaataaatttttatctataaaaaaaggacgttatggtgaatttttaggt
tgtagtggttttcctaaatgtaaaaatatagtaaatttaaaaaaatattatcaaaaataa
DBGET
integrated database retrieval system
