Candidatus Phytoplasma mali: ATP_00119
Help
Entry
ATP_00119 CDS
T00729
Symbol
himA
Name
(GenBank) Nucleoid DNA-binding protein, similar to integration host factor (IHF) and HU
KO
K03530
DNA-binding protein HU-beta
Organism
pml
Candidatus Phytoplasma mali
Brite
KEGG Orthology (KO) [BR:
pml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pml03032
]
ATP_00119 (himA)
03036 Chromosome and associated proteins [BR:
pml03036
]
ATP_00119 (himA)
03400 DNA repair and recombination proteins [BR:
pml03400
]
ATP_00119 (himA)
DNA replication proteins [BR:
pml03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ATP_00119 (himA)
Chromosome and associated proteins [BR:
pml03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
ATP_00119 (himA)
DNA repair and recombination proteins [BR:
pml03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
ATP_00119 (himA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_1
HU-CCDC81_bac_1
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
CAP18306
UniProt:
B3R0E2
LinkDB
All DBs
Position
complement(159361..159651)
Genome browser
AA seq
96 aa
AA seq
DB search
MNKIEFIKQLSDKLETTEKEGKKIINAVIDVIRINLLQNEKILITGFGTFCVKTRSEREG
KHPKTREIIKIPAKKIPSFKMSKRFKDVFIQIKKKL
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaattgaatttataaagcagttatctgataaattagaaactactgaaaaagaa
ggaaaaaaaattataaacgctgttattgatgttatcagaataaatttgttacaaaacgaa
aaaattttgattactggttttggtactttttgtgtaaaaacaaggagtgagcgtgaagga
aaacatccaaaaacaagagagataattaaaattcctgctaaaaaaattccttcttttaaa
atgagtaaaagatttaaagatgtttttattcaaattaaaaaaaaattataa
DBGET
integrated database retrieval system
