Candidatus Phytoplasma mali: ATP_00254
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Entry
ATP_00254 CDS
T00729
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pml
Candidatus Phytoplasma mali
Pathway
pml03030
DNA replication
pml03430
Mismatch repair
pml03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ATP_00254 (holA)
03430 Mismatch repair
ATP_00254 (holA)
03440 Homologous recombination
ATP_00254 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pml03032
]
ATP_00254 (holA)
03400 DNA repair and recombination proteins [BR:
pml03400
]
ATP_00254 (holA)
Enzymes [BR:
pml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ATP_00254 (holA)
DNA replication proteins [BR:
pml03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ATP_00254 (holA)
DNA repair and recombination proteins [BR:
pml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ATP_00254 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HTH_28
Motif
Other DBs
NCBI-ProteinID:
CAP18441
UniProt:
B3QZQ4
LinkDB
All DBs
Position
327148..328122
Genome browser
AA seq
324 aa
AA seq
DB search
MISSPLNLTIVNQKFFLEKKIKFLVQQSKKKNIHCIFYNSEQNNLYNLEQELKTTNFFST
KKIIIIKKSNLLFESITIKNNFLFNYFKNPRLDVILYFFSKNFNFSLDIKNILNKYFKIN
EIPILQKKDFFIYVKKKLKKKGLDISDKIIISLIEKTNYNLFFLEEEIKKIQIYSYYEPK
INKNILENLVFSDFEYYIFKLINYFLNNKISSAHNILKYLIQNKEDVYYIINQMFIKLKQ
LIIVQDLLLKKHNQSQISSILNFSPGKVYFLIKETYLFSINQITHLFMNLLELKYLIKTN
QIDSNIGLEIFMINICFNRSVPKP
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgatttcatctccgcttaatttgacaattgttaatcaaaaattttttttagaaaaaaaa
attaaatttttagttcaacaaagtaaaaaaaaaaatattcattgtattttttataattca
gaacaaaataatttatataatttagaacaagaattgaagacaactaattttttttctact
aaaaaaataattattataaaaaaaagtaatttgttatttgaatcaattactataaaaaat
aattttttgtttaattattttaaaaatccacgtttggatgtaatactttatttttttagt
aaaaattttaattttagtttagatataaaaaatattttaaataaatattttaaaattaat
gaaattcctattttacaaaaaaaagatttttttatttatgttaagaaaaaattgaaaaaa
aaaggattagatatttctgataaaattattattagtttgattgaaaaaactaattataat
ttattttttttagaagaagaaattaaaaaaattcaaatttatagttattatgaacccaaa
attaataaaaatattttagaaaatttggttttttctgattttgaatattatatttttaaa
ttaattaattattttttaaataataaaatatcatctgcacataatatattaaaatattta
atacaaaataaagaagatgtttattatattattaatcaaatgtttattaaattaaaacaa
ttaattatagttcaagatttattattaaaaaaacataatcaatcgcaaatttcctctatt
ttaaatttttctccaggaaaggtttattttttaataaaagaaacttatttattttcaatt
aatcaaatcactcatttatttatgaatttattagaattaaaatatttaattaaaactaat
cagatagattctaatatagggttggagatttttatgattaatatttgtttcaatcgaagt
gttccaaaaccttag
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