Candidatus Phytoplasma mali: ATP_00306
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Entry
ATP_00306 CDS
T00729
Symbol
rpoD
Name
(GenBank) DNA-dependent RNA polymerase sigma subunits
KO
K03086
RNA polymerase primary sigma factor
Organism
pml
Candidatus Phytoplasma mali
Brite
KEGG Orthology (KO) [BR:
pml00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ATP_00306 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pml03021
]
ATP_00306 (rpoD)
Transcription machinery [BR:
pml03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ATP_00306 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
bHLH_NPAS4
DUF5003
GSH_synthase
Motif
Other DBs
NCBI-ProteinID:
CAP18493
UniProt:
B3QZV6
LinkDB
All DBs
Position
385627..386886
Genome browser
AA seq
419 aa
AA seq
DB search
MNWKILIENLFKKFNIRQKIKNEFFFNYVKKNDINNNLLLNFKKEDDNSLILKYSEDKIK
DLSDSLDEIILEEEDLVYEDETDTLVLDEFEEKKEEFLNIDKNPIDLKFYDPVKIYLKEI
GQIPLLTLEEEQEQFRLVYDGREAEAKLESYRKKEIELSEKEISELNDILKISNKAKHRL
VEANYRLVVSIAKRYIRRGLEFLDLIQEGNRGLMRAIEKFNIDKGCKLSTYATFWIVQKI
LRAVADQARIIRLPVHIVDRINIISMAKSKLRLKLHREPTIEELSEFINISEKKLRIIEI
IKKKPISLEARVGEKDDSSLGEFISDPDSLSPHDYMLQEIMKNTLNEILEDTLTDREEKI
LRMRYGLSNGKVHTLEEVGNVFGVTRERIRQIEAKAFRRLRTPARQNKLKTLYNRMNKK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaattggaaaattttaattgaaaatttatttaaaaaatttaatattagacaaaaaata
aaaaatgaatttttttttaattatgttaaaaaaaatgatattaataataatttattattg
aattttaaaaaagaagatgataattctttaatcttaaaatattcagaagataaaataaaa
gatttatctgattcgttagatgaaattattttagaagaagaagatttggtttatgaagat
gaaacagatactttagtattagatgaatttgaagaaaaaaaagaagaatttttaaatatt
gataaaaatccaattgatttaaaattttatgatcctgttaagatatatttgaaagaaatt
ggccaaattccattattaactttagaagaagaacaggaacaatttagattagtttatgat
ggaagagaagcagaagcgaaactagaaagttatagaaaaaaagaaattgaattatcagag
aaagaaatttctgaattaaacgatattttaaaaatatctaataaagctaaacatagattg
gttgaagctaattatcgtttagttgtttctatcgctaagcgttatattagaagaggttta
gaatttttagatttgattcaagaaggcaacagaggattaatgcgtgctatagaaaaattt
aatattgataaaggttgtaaattgtctacttatgctactttttggattgtacaaaaaatt
ttaagagcagtagctgatcaagctcgtattattcgattacctgttcatattgtggataga
attaatattatttctatggcaaaaagtaagttaagattaaaattacatcgagaaccaact
attgaagaattatctgaatttattaatatttctgaaaaaaaattaagaattatcgaaata
attaagaaaaaacctatttctttggaagcaagggttggagaaaaagatgattcttcttta
ggggaatttattagtgatcctgattctttatcacctcatgattatatgttacaagaaatt
atgaaaaatactttaaatgaaattttagaagacactttaacagatagagaagaaaagatt
ttaagaatgcgttatggattatcaaatgggaaagttcatactttagaagaagtaggaaat
gtatttggtgttacacgtgaaagaattagacaaatagaagctaaagcttttagacgttta
agaactcctgcaagacaaaataaattgaaaactctttataataggatgaataaaaaatag
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