Candidatus Phytoplasma mali: ATP_00471
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Entry
ATP_00471 CDS
T00729
Symbol
nfo
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
pml
Candidatus Phytoplasma mali
Pathway
pml03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pml00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ATP_00471 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pml03400
]
ATP_00471 (nfo)
Enzymes [BR:
pml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
ATP_00471 (nfo)
DNA repair and recombination proteins [BR:
pml03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ATP_00471 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
CAP18658
UniProt:
B3R050
LinkDB
All DBs
Position
566409..567269
Genome browser
AA seq
286 aa
AA seq
DB search
MLKIGCFVSLKKPDMFYGAVQAAIAFQANTFMVYSGPPTNTQRVALNNFKISEALTLLKQ
HQINPDDLVGHAPYIINLANPNPVNRSFAIDFLTQEIIRFNEMQISQMVLHPGNALRQTK
NTAIELIAQGINQIFKNTSHCRTKIALETMAGKGTEIGREFQELKAIIQLIQDQSRIKVC
FDTCHVFDAGYDIKNNFLKVIELFDQIIGLKYLSCLHINDSKNCLGSKKDRHQNLGLGQI
GLKALMEIIYHPLFLSLPKILETPYIDGQPIYKQEIIMIRTENHFD
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaaattggttgttttgtttctttaaaaaaacccgatatgttttatggtgcggtt
caagcggctattgcctttcaagcgaatacttttatggtttatagtgggccacccacgaac
actcaacgtgtggctttaaataattttaaaatttctgaagctttaacgttattgaaacaa
catcaaattaatccggatgatttagttggtcatgctccttatattattaatttagcgaat
cctaatccagttaatcggtcattcgccattgattttttaactcaagaaattattcgtttt
aacgaaatgcaaattagtcaaatggtactacatcctggaaatgctcttcgacaaactaaa
aataccgccattgaattaattgctcaaggaattaatcaaatttttaaaaatacctcacat
tgtcgaactaaaattgctttagaaactatggctggtaaaggtacagaaattgggcgcgaa
tttcaagaactaaaagctattattcaattaattcaggatcaaagtcgaattaaggtttgt
tttgatacttgtcatgtatttgatgcgggttatgatattaaaaataattttttaaaagtg
attgaactttttgatcaaattattggtctgaaatatctttcttgtttgcatattaatgat
tccaaaaactgtttaggtagtaaaaaagatcgtcaccaaaatttaggcttaggacaaatt
ggattgaaggcattaatggaaattatttatcatcctttatttttatctttgccaaagatc
ttagaaacaccttatattgatggtcaaccgatttataaacaagaaattattatgattaga
accgaaaatcattttgattaa
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