Prochlorococcus marinus subsp. pastoris CCMP1986: PMM0040
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Entry
PMM0040 CDS
T00142
Name
(GenBank) Putative penicillin-binding protein
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pmm
Prochlorococcus marinus subsp. pastoris CCMP1986
Pathway
pmm00550
Peptidoglycan biosynthesis
pmm01100
Metabolic pathways
pmm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pmm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PMM0040
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PMM0040
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmm01011
]
PMM0040
Enzymes [BR:
pmm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PMM0040
Peptidoglycan biosynthesis and degradation proteins [BR:
pmm01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PMM0040
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Stimulus_sens_1
Motif
Other DBs
NCBI-ProteinID:
CAE18499
UniProt:
Q7V3N4
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All DBs
Position
38231..40021
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AA seq
596 aa
AA seq
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MKNSNFNNKFPSFNRQPFVFYLITTFTFLLILIRLIFLQLLNHETYKKMSDENRIRLIST
QPIRGRILDKNGLILADSRFKYSLIIKPQYVSKKAWQKYKSKISKLFNISSDSLQKKYSD
GLKNKNFSITLLDDLKVDQVIKFKENENILNGLEISTKMIRNYPYKTVASHVIGYTQPIT
DSEFNILSKKGYKFNDLIGRTGIEFVYEDHIRGEWGGEMIEVNSSGTFTKSLGIKPSKQG
KDLELTIDLNLQLIAEEVLKDKNGGAIIVMDPRDGAIRAMASKPTFDLNFFSKEFKPEKE
YNALFNSPAKPLFNRALNAYDPGSVWKIVTALAGLESGKFPPETSLETKPCITYGSQCFR
EHNDLGFGTIGYEDALRVSSNTFFYQIGYGVGVDEIYNVSKKLGFAALSGIEISEQENVG
LVASSQWAKKGRGWGEPGRTPWVPEDIASMSIGQFVVQVTPIQIARAYAVIANGGYLVTP
HLSKKEDQLLTNQKRIKIDIDPNNLQLVKNGLRKVVESGTGVSINYGVSNLPPVSGKTGT
AEDGEGGSDHAWFVCFTPSDKSELLIVAFAQNTPGGGSVHALPMAREILKVWNENK
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaatagtaacttcaataataagttcccctcttttaatagacagccttttgttttc
tatttaattactacttttacttttttattaatattaattagattaatttttcttcaatta
ttaaatcatgagacttataaaaaaatgtctgatgaaaatagaattaggctaatttctact
caaccaattagagggaggatactagataaaaatggattaatattggcagatagccgtttt
aagtactctttaataattaaacctcaatacgtcagcaaaaaagcatggcagaaatataaa
tcaaagatttcgaaattattcaatatttcatctgattcacttcaaaagaaatattctgat
ggtctaaaaaataaaaatttttcaattactttattagatgatttaaaagttgatcaagtt
atcaaatttaaagaaaatgaaaatatcttaaatggcttagagatttcaacaaaaatgatt
agaaattatccttataaaactgttgcttctcatgtgattggttatacccaacccattaca
gattctgaatttaatattttgtcaaaaaaaggttataaattcaatgatttaataggaaga
actggaattgagtttgtttatgaagatcatataagaggagaatggggaggagaaatgatt
gaagtgaactcttccggtacttttacaaaatctttaggtattaaaccatcaaaacaaggg
aaagaccttgaattgacaattgatttgaatttacaattaatcgctgaagaagtgcttaaa
gataaaaatggaggagcaataatagttatggatcctagagatggtgccataagagcaatg
gctagtaaaccaacatttgacttaaattttttttcaaaagaatttaaaccagaaaaagaa
tataatgctctgttcaattctcccgctaaaccattatttaatagagctttaaatgcatat
gatccaggaagtgtttggaaaattgtaactgctttagctggtttagaaagtggaaagttt
cctcctgaaacttctttagaaactaaaccttgtattacatatggaagtcaatgttttaga
gaacataatgacttagggttcggaacaataggttatgaagatgctttgcgagtttcaagt
aatacttttttttatcaaattggctatggcgtaggtgtagatgaaatttataacgtttct
aagaagcttggctttgccgctctatctggaatcgaaatttccgaacaagaaaatgtaggt
ttagttgcaagtagtcaatgggctaaaaaagggagaggctggggggaaccaggaagaact
ccttgggttccagaagacatcgcgagtatgtctatcggtcaatttgttgtccaagttacg
cctattcaaatagctcgtgcatatgcagtaatcgcgaatggtggctatttagtaactcct
catttatctaaaaaagaagatcaacttttaacaaatcaaaaacgtataaaaattgatatt
gatccaaataatcttcagctagtaaaaaatggtttaaggaaagtagttgaatctggaaca
ggggtttctatcaattatggggtatctaatcttcctccagtttcgggtaaaactggtact
gctgaagatggagaaggaggttcagatcatgcatggtttgtttgctttactccttcagat
aaaagtgagttgttaatagttgcttttgcacaaaatacgcctggtggaggatctgtacat
gcactacctatggctagggaaattttaaaagtttggaatgaaaataaataa
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