Prochlorococcus marinus subsp. pastoris CCMP1986: PMM0133
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Entry
PMM0133 CDS
T00142
Symbol
radA
Name
(GenBank) putative DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pmm
Prochlorococcus marinus subsp. pastoris CCMP1986
Brite
KEGG Orthology (KO) [BR:
pmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmm03400
]
PMM0133 (radA)
DNA repair and recombination proteins [BR:
pmm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PMM0133 (radA)
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Gene cluster
GFIT
Motif
Pfam:
ATPase
Zn_ribbon_LapB
AAA_25
DnaB_C
ChlI
Lon_C
DUF7125
GvpD_P-loop
AAA_22
Rad51
AAA_5
AAA_14
AAA
AAA_16
AAA_24
nSTAND3
nSTAND_NTPase5
ABC_tran
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
CAE18592
UniProt:
Q7V3E3
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All DBs
Position
complement(130689..132041)
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AA seq
450 aa
AA seq
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MSNKFSTFICQNCGSETSQYFGRCLNCNEWNTIVEERKNTRSKITSVNKNKKSKLFNEIE
IGNISRFTSGFKEFDRVLGGGIVPGSIVLLGGEPGIGKSTIVLQSAGKISLNEKVLYITA
EESLEQVKIRWERLNQSSLDLKIYAETNLSLIIEEIKKIKPGFAIIDSIQAINNDEMESS
PGSVSQVRTCSSELQNLAKENNIALLIIGHVTKDGALAGPKTLEHLVDVVLNFEGDNIAS
HRLLRSVKNRFGSTFEIGIFEMLENGLREVINPSSIFTNKENIAGVTTTITNEGSRPFAV
DIQALVNKTFYNNPRRTTTGMSINRLHQILAVIEKHVGIKLSEYDCYIATGGGFEINDPS
SDLGVAISILSSLKNIPPLINCAFIGELGLSGQVRQASNIRAKIDEAIRLGIKNILLPKI
TSEIKDSFQKFIQIKEISNINEAINYALNE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataaattttcgacttttatttgtcaaaattgcggatctgagacttctcaatac
ttcggaagatgcttaaattgtaatgaatggaataccatcgttgaagaaagaaaaaacact
agatctaaaataactagtgttaataaaaataaaaaatctaagctgtttaatgaaatagaa
ataggtaatatatcaagatttacgagtggttttaaagagtttgacagagtactaggtggt
ggtatagttccgggatctatagttttacttggaggagaaccaggaattggtaaaagtacc
atagtgcttcaatcagcagggaaaatatcccttaatgaaaaagttttatacatcactgca
gaagaatctttagaacaagtaaaaataagatgggaaagattaaatcaaagcagcctcgat
ttaaaaatttatgcagaaactaatttatctttaattatcgaagagattaaaaaaataaaa
cctggttttgcgattattgatagtatccaagctattaataatgatgagatggaaagttct
ccaggatctgtttcccaagtaaggacttgttcatctgaacttcagaatcttgctaaagaa
aataatatagcccttttgataataggtcacgttacgaaagatggagctcttgccggtcca
aaaactttagaacatttagtagatgtggtactcaattttgaaggagataatattgcctcc
catagattactaagaagtgtaaaaaatagatttggatcaacttttgaaattggaattttt
gaaatgttagaaaatggtttaagagaagttattaaccctagttcaatattcacaaataaa
gaaaatatagccggcgtcacaaccactatcactaatgaaggatcgagaccatttgcagtt
gatattcaagctttagtaaataagactttctacaataacccaagacgaacaacaactgga
atgagcataaatagattacatcaaatattagcagtgattgaaaaacatgttgggattaaa
ttatcagaatatgactgctatatagctacaggaggtggctttgaaataaatgacccatct
tcagatttaggagttgccatatcaatcttatcaagcttaaaaaatattccaccattgata
aattgtgcatttattggcgaattaggtttaagcggtcaggtaaggcaggcaagtaatatt
agagccaaaattgatgaggctattaggcttggtattaaaaatattttactacctaaaatt
actagtgaaattaaagatagttttcaaaaattcatacaaattaaagaaatttcaaatata
aatgaagctattaattatgcattgaacgagtaa
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