Prochlorococcus marinus subsp. pastoris CCMP1986: PMM0193
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Entry
PMM0193 CDS
T00142
Symbol
rluD
Name
(GenBank) putative pseudouridylate synthase specific to ribosomal large subunit
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pmm
Prochlorococcus marinus subsp. pastoris CCMP1986
Brite
KEGG Orthology (KO) [BR:
pmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmm03009
]
PMM0193 (rluD)
Enzymes [BR:
pmm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
PMM0193 (rluD)
Ribosome biogenesis [BR:
pmm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PMM0193 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CAE18652
UniProt:
Q7V392
LinkDB
All DBs
Position
complement(186826..187794)
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AA seq
322 aa
AA seq
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MNSSNKNSFGVGKGELIEITYEMSLPMRLDRWLVSKRPEQSRARIQYFINAGLVLVNYKT
AKAKTPLKTGDNIQIWMPPPEPLIYLKPEKMNLNILFEDEHIIVINKQSGLIVHPAPGHK
SGTLVNGLLFHCKDLPGINGKLRPGIVHRLDKDTSGCMVVAKSQESLVNLQIQIKEKIAS
RNYIAVIHGVPNTSEGKIVGHIGRDKLNRLKYAVVDEKSGRYACTYWKLLERLGNYSLMS
FKLDTGRTHQIRVHCAHINHPILGDPLYGRCKKLPCKLDGQALHAVELGLFHPINGEEMK
FEAELPQEFQKLLRVLKKSIKV
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaactcaagtaataaaaactcttttggagtaggaaaaggtgaattaatagaaattact
tatgaaatgtcccttcctatgcgactcgataggtggctagtaagtaagaggcctgaacag
agtagagcaagaatacaatattttataaacgcgggattagttcttgttaactacaaaact
gcaaaagctaaaaccccattaaaaacaggagataatatacaaatttggatgcctcctcca
gaacctctcatatatttaaagccagaaaagatgaacttaaatatcctttttgaagatgaa
cacatcattgtaattaataaacaatcaggactcatagtccatccagctccaggacataaa
tcaggcaccttagtaaatggactactttttcactgtaaagatttacctggaataaatggc
aagttaagacctgggatagttcatagattagataaggacacatctggctgtatggttgta
gcaaaaagccaagaatcacttgtcaatcttcaaatacaaataaaagaaaaaatcgcttca
agaaactatattgcggtaattcatggagtcccaaatacttcagaaggtaaaattgttgga
cacataggtagagataaactaaatcgattgaagtatgcagtagttgatgaaaaatccggg
agatatgcatgtacttattggaaattattagaaagattaggtaattattcattaatgagc
ttcaaattagatactggaagaactcatcaaataagagttcattgtgcacatatcaatcac
cccattcttggtgatcctttatatggaaggtgtaaaaagcttccttgcaaattggatggt
caggctttacatgctgtagagctaggactttttcatcctataaatggagaagaaatgaaa
tttgaagcagaattaccccaagaatttcagaaattattgagagtcttaaaaaaatcaatt
aaggtttaa
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