Prochlorococcus marinus subsp. pastoris CCMP1986: PMM0304
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Entry
PMM0304 CDS
T00142
Symbol
uvrD
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pmm
Prochlorococcus marinus subsp. pastoris CCMP1986
Pathway
pmm03420
Nucleotide excision repair
pmm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PMM0304 (uvrD)
03430 Mismatch repair
PMM0304 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmm03400
]
PMM0304 (uvrD)
Enzymes [BR:
pmm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PMM0304 (uvrD)
DNA repair and recombination proteins [BR:
pmm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PMM0304 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PMM0304 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
DEAD
ResIII
ATP-cone
Motif
Other DBs
NCBI-ProteinID:
CAE18763
UniProt:
Q7V2Z4
LinkDB
All DBs
Position
complement(290882..293290)
Genome browser
AA seq
802 aa
AA seq
DB search
MHQTNNFLFKSLNNAQLNAVKHINGPLLVVAGAGSGKTKALTHRIANLIENNSVDPHNIL
AVTFTNKAAKEMKARLQVLLAQEIALNQFGQPWSTLKEFDQNQLRTNIDQERLRDLWIGT
FHALFSRLLRYDIEKYQDPEGLTWTRQFSIYDETDSQTLVKEIVGQDMSLDPKRFDPKKI
KRAISNAKNQCFTANDLEEKADNHFDKVIADAYRRYRISLSKNNALDFDDLLLLPVFLLR
QNDLVRDYWHKRFQHVLVDEYQDTNRTQYELIKLITAGNTEPNKFCEWNDRSIFVVGDAD
QSIYSFRAADFRILIGFQEDFKNSSNNNQKASLVKLEENYRSSSNILTAANSLIENNTER
IDKVLRSTREEGELLKLLSCDDEISEAEAITTKLRSLNNYNNQPIWKNFAILYRTRAQSR
VLEESLVRWRIPYTIFGGLRFYDRREVKDAVAYLKVLVNSSDNISLLRIINVPRRGIGKT
TIQKLNELSNKLNIPLWEVINDKQSLDETIGRSSKGINKFTELMNDLLCYIENSGPAQIL
QLILEKSGYLSDLLTSGSEESEDRRNNLQELINAATQFEEETENPDVEGFLSTAALTTDN
DTKKNHPNSVTLMTLHNSKGLEFQNVFITGLEQGLFPSHRSIDTPSLLEEERRLCYVGIT
RAKERVFLSHARERRLWGGMREATIPSIFLSEIPEELIDGELPQSGGASIRRDRHLDRLT
RVDRKDLNESINRPINAVRKLYSGPSKGKSWLIGDKVIHSKFGKGEIIHIFGSGEKISLA
VKFGDKGSKILDPRLAPIRAIN
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
gtgcatcaaactaacaacttcctttttaaatccttaaataatgcacaactaaacgctgta
aaacatatcaatgggccactgctagttgtagcaggtgcaggtagtgggaaaaccaaggct
cttactcatagaattgctaatttaattgagaataactctgtagatccccataacattctc
gcagtaacttttacaaataaagctgctaaagaaatgaaagcaagacttcaagtactactt
gcgcaagaaatagctttaaatcaatttgggcagccttggtcaaccctcaaggaatttgac
cagaatcaattaagaacaaatattgatcaagagagactgagggacctatggataggaact
tttcatgcattattttcgagacttttaagatacgatatagaaaaatatcaagatcctgaa
ggcctaacctggacacgacaattttctatttatgacgagacagattctcagaccctagta
aaagaaattgttggtcaagatatgagtcttgatccaaaaagatttgatcctaagaaaatt
aagagggctattagtaacgcaaaaaatcaatgttttacagctaatgaccttgaagaaaaa
gctgataatcattttgataaagtaattgcagatgcttacagaagatataggatatctctc
tcaaaaaataatgctttagactttgatgatcttctactacttcctgtgtttttattaagg
caaaatgatttagttagggattactggcataaaagattccagcatgtattagttgatgaa
tatcaagatacaaataggacacaatatgaactgattaaattaattacggctgggaatact
gaaccaaacaaattttgcgaatggaatgatagatcaatttttgttgtcggagatgcggat
caaagtatttatagttttagggcagcagatttcagaatattaattggatttcaggaagac
tttaaaaattcatctaataataatcagaaagcctctctggttaaattagaagaaaactat
agatcttcatcaaatattcttaccgctgcaaactctttgattgaaaataatactgaaaga
attgataaagttttaaggtctacaagggaggaaggagaacttttaaagttgcttagctgt
gatgatgagatatctgaagctgaggcaataacaacaaaattaaggtctctaaataattac
aataatcaaccaatctggaaaaattttgcaatcctctatagaactagggctcagtcgaga
gtattagaagaatctcttgtaaggtggagaattccatatacaatctttggcggattacgt
ttttatgacagaagagaagtaaaagatgctgttgcttatttaaaagtcttagtaaattct
tcagataatataagccttttaagaataataaatgtcccaagaaggggaataggaaaaaca
actattcaaaagcttaatgagctatcaaataagttgaacattcctttatgggaggtcata
aatgacaaacaaagcttagatgagactataggcagatcatcaaagggcattaataaattc
acagagcttatgaatgaccttctttgctatatagaaaactcggggcctgctcaaattctt
caattaattctagaaaaaagcggttacttaagtgatttattaacaagtggttcagaggaa
tctgaggatagaagaaataatcttcaggaattaataaatgctgctactcaatttgaagaa
gagaccgagaacccagatgtagagggattcttgtcaacagcagctttaacaacagacaat
gatacaaaaaaaaatcatcctaattctgtcactttaatgactctccataacagtaaagga
ttagaatttcaaaatgtatttataactggactagaacaaggtttatttccaagccacagg
tcaattgatactccttctcttctagaagaagaaagaagattatgctatgtaggcataaca
agagctaaagagagagttttcttatcacatgcgagagagagaagattgtggggaggcatg
cgagaagcaacaattccttcaatatttctctcagaaataccagaggaactaattgacggg
gaattacctcaatcaggtggtgcttctatcagaagggatcgtcatcttgaccgtttaaca
agagtggatagaaaagatttaaatgaatctattaatagacctataaatgcagtaagaaaa
ctatattcaggacccagtaaaggaaaaagttggttgattggagataaagtaattcactct
aaatttggcaaaggtgaaattatacatatttttggcagtggcgaaaaaatatccttagca
gtaaagtttggtgataaagggagcaaaattttagacccaagattagctccaataagagca
ataaactga
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