KEGG   Prochlorococcus marinus subsp. pastoris CCMP1986: PMM0728
Entry
PMM0728           CDS       T00142                                 
Name
(GenBank) DEAD/DEAH box helicase:Helicase C-terminal domain
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pmm  Prochlorococcus marinus subsp. pastoris CCMP1986
Brite
KEGG Orthology (KO) [BR:pmm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmm03400]
    PMM0728
Enzymes [BR:pmm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PMM0728
    5.6.2.6  RNA 3'-5' helicase
     PMM0728
DNA repair and recombination proteins [BR:pmm03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PMM0728
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII Cas3-like_C_2 DUF6925
Other DBs
NCBI-ProteinID: CAE19187
UniProt: Q7TUB3
LinkDB
Position
complement(690442..692919)
AA seq 825 aa
MVSFINKNEIKNIEKFFYKNGWEPLPYQIESWKAYFNGENGIIQVPTGCGKTYAALMGPL
SKLKDSTKPTGLSILLITPLKALSRDLKNAVHLASQFFNQEITVGIRNGDTSPYEKKMQI
LKPPNILITTPESLSLLLSNKESKKIFSNIFSIIIDEWHELMGSKRGNQCELSLSWLRGN
KKDLQIWGMSATIGNITEAARAIVGTKGEIPTVISTNIQKEIEILSILPEEETTFPWSGH
LGIRSYSLLLKVLDKNKSTLLFTNTRNQSERWYQCLKFCLPEMEDKISLHHGSLDKDERK
IVEDGVKNGSIKWVVCTSSLDLGIDFQPVDQIVQIGSAKNLARLIQRAGRSAHRPGGKSK
IIFMPTNSLELLEISAMRRIIKSGISESIRLPELSFDVLLQHLVSLACGPGFNPITEKEK
IKDCWSYRNLNDKDWDWCIDFLEYGGKCLKAYPKYKKIEREKSKGDEHNFKYFVKDKSLI
RMHKFNIGTITSDKFINVKYLKGKSLGNLEENFASKLKAGDTFYFAGKMLQFIKIRDMTL
YVKKSSNKSSLIPAWVGGQMAISDLLSDNLRSELDICNNLENDDQYINKELISLLPILKK
QKDLSDIPKKNQLLIEIYKTKELTSLFVFTLDGKFVNEGIAFLWALRFASKKQSTFSISA
NDFGFSLTTSENYDFSSIEKEFSYFIENRNLEEDLENAINFSELTKRRFKNIAQISGLVN
QNNPTKTKSSSQLQISSSLFYDVFTRYEEGHLLIKQAHEEVKEYQLENKRITNSLERLSN
LKIILNETKTPSPFAFPLLVERLKNTLSNESIEKRVDKLIKKYNS
NT seq 2478 nt   +upstreamnt  +downstreamnt
atggtaagctttataaataaaaatgaaattaagaatatagaaaaatttttttataaaaat
ggatgggaacctctgccatatcaaattgaatcatggaaagcatatttcaatggagaaaat
ggaatcattcaggttcctacaggatgcggtaaaacttatgcagctttaatgggacctctt
tcgaaattaaaagattccacaaaaccaactggattgagtattttactaataactccatta
aaagcattaagtagagatttaaaaaatgcagtacatttagcatctcaattttttaatcaa
gaaataaccgttggaatccgaaatggtgatacaagcccatatgaaaagaagatgcagata
cttaaacctccaaatattctaataacgactccagaatcactttctctcctcttatctaat
aaagaatctaaaaaaatatttagtaatatattttcaataattattgatgagtggcacgag
ttaatgggtagtaaaagaggtaatcaatgtgaattatcactaagttggcttagaggaaat
aaaaaagatttacaaatttggggaatgtctgccactatcggtaatattacagaagcagca
agagctattgttggaacaaaaggggaaataccaacagtaataagtactaatattcaaaaa
gaaatcgaaatccttagtattttacctgaagaagaaacgacctttccatggagtggacat
ttaggaattaggagttattccttacttctaaaagtattagataaaaacaaaagtacacta
ctattcactaacactagaaatcagtctgagagatggtatcaatgcttaaaattctgtctc
ccagaaatggaagataagatttctttacatcatggttcattggataaagatgagagaaag
atagttgaagatggggttaaaaacggatctataaaatgggttgtttgtacaagctcatta
gatttagggattgactttcaacctgttgatcaaatagtacaaataggaagtgctaaaaac
ttagctcgacttattcaaagggcagggaggagtgctcatagacctggaggaaagtcaaaa
ataatttttatgcctactaactcattagaattactcgaaattagtgctatgaggagaata
ataaaaagtggaatatctgaaagtattaggctccctgaactatcttttgatgttcttctt
cagcatctagttagtttagcttgtgggccaggttttaatcccattactgagaaagaaaaa
attaaagattgctggagttacagaaatctaaatgataaagattgggattggtgtattgat
tttttggagtatggaggaaaatgtttgaaagcttatccaaaatataaaaagatagaaaga
gaaaaatcaaaaggggatgaacataacttcaaatattttgtaaaagataaatctttaata
aggatgcataagtttaatattggaacaataacaagcgataaatttataaatgtaaaatat
ttaaaaggaaaatcattaggcaatttagaagaaaactttgccagtaaattaaaagcaggt
gatactttttacttcgctggcaaaatgcttcagtttataaaaattagagatatgacttta
tatgtaaaaaaatcatccaataaaagttctttaattccagcatgggttggaggtcaaatg
gctatctctgatcttttaagtgataatttaagaagcgaactagatatttgcaataactta
gaaaatgatgatcagtatattaataaagaattaatatcattacttccaattttaaaaaaa
cagaaagatctttcagatattccaaaaaagaatcaactacttattgaaatctataaaact
aaagaattaacaagtctttttgtttttacacttgatggaaaatttgttaatgaaggaatt
gcttttctttgggctttaagatttgctagtaaaaagcaatctacatttagtatttctgca
aatgattttggttttagcttaaccacttcagaaaattatgacttttcaagtattgaaaaa
gaattttcatattttatagaaaatagaaacttggaagaagatttagaaaatgcaataaat
ttttcagaattaacaaagagaagatttaaaaacattgctcaaattagtggattagtaaat
caaaataatcccaccaaaacaaaaagttcatcacaacttcaaataagttcaagtcttttt
tatgatgtttttactagatatgaagagggtcatctgctaatcaaacaagcacatgaagaa
gtaaaagagtaccaattagaaaataaacgaattactaattccttagaaagattatctaat
ttaaaaataatattaaacgagactaaaactccaagtccatttgcttttcctttattagtt
gaaagacttaaaaatacattaagcaatgaatctatagaaaaaagagtagataaacttata
aaaaaatataatagttaa

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