Prochlorococcus marinus subsp. pastoris CCMP1986: PMM0868
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Entry
PMM0868 CDS
T00142
Name
(GenBank) probable ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pmm
Prochlorococcus marinus subsp. pastoris CCMP1986
Brite
KEGG Orthology (KO) [BR:
pmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmm03016
]
PMM0868
Enzymes [BR:
pmm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
PMM0868
Transfer RNA biogenesis [BR:
pmm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
PMM0868
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Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
CAE19327
UniProt:
Q7V1J9
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All DBs
Position
complement(824635..825819)
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AA seq
394 aa
AA seq
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MRDLTNLKTFIIDSKDPKEVDDAFSLELFEGNKKKLWIHISNPCKLFLTDSKIDIDARSK
SSSLYLINQYIPMLPTEIIEKANLNQNKISDTISASIIFNDDGSINKYEIVEAKIKPKYQ
LLYEDAEEIIELEPKEEFEIVEIKNLLLNSINYRKKQGAIIFDTPGYKINIKNGNVEIIN
IQKSISHSIVSESMILMGYVTSLYLFENNIATPYRTHKINCDAEEILERYKDSDIKYSIL
KQYMGKSYITTKANKHESLGLLKYTQCTSPLRRYLDLIVQRQVFNNINNIERLSHNKINE
LIDITKIKQLENNNIYKNDKLKYLNIFFKNEIKTSHKIIFIKWINNKKGIALVYFPEYSL
ELLIVLFISVETYTNKIYKVKYNISNNNLLEFIH
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
ttgagagatttaactaatttaaaaacttttataattgattccaaggatccaaaagaagtt
gatgatgctttttccctggaattatttgaaggaaacaaaaaaaaattatggatacatatt
agcaatccatgcaaattatttttaacagattcaaaaattgatattgatgcaagaagtaaa
agtagcagcctctacttaattaatcaatatattcctatgctgccaactgaaattatagaa
aaagcaaatttaaatcaaaataaaatttcagatacaataagtgcctcaattatctttaat
gatgatggttcaattaataaatatgaaatagtagaggcaaaaataaaaccaaaatatcaa
ttattatatgaagatgcagaagaaattattgaattagaacctaaagaagaatttgagata
gttgaaattaagaatttactacttaatagtattaattatcgaaagaaacaaggagcaatt
atttttgatactccaggttataaaattaatattaaaaatggtaatgtagaaattattaat
atacaaaaaagtatttctcattccattgtatctgaatccatgatactaatgggttatgtc
actagtttatatttatttgaaaataatatagctactccctacagaactcataaaatcaat
tgtgatgcagaagagatattagaaagatacaaagatagtgatataaaatattcaatatta
aagcaatatatgggtaaaagttatataactactaaggctaataaacatgaatcgttaggt
ctacttaagtatactcaatgtacgtctccactaagaagatatttagatttaattgttcaa
agacaagtttttaataatataaataatattgagagattaagtcataataagattaatgaa
ttaatagatatcacaaaaattaaacaattagaaaataataatatttacaaaaatgataaa
ttaaaatatttaaatatattctttaagaatgaaataaaaacatcccataaaataatcttt
ataaaatggataaataataaaaaaggtattgctttagtatactttccagaatattcattg
gaactattgattgtactctttatttctgtagaaacttatactaataaaatatataaagtt
aaatataatataagtaataataatttattagagtttattcactag
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