Prochlorococcus marinus subsp. pastoris CCMP1986: PMM1063
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Entry
PMM1063 CDS
T00142
Symbol
gyrA
Name
(GenBank) DNA gyrase/topoisomerase IV, subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pmm
Prochlorococcus marinus subsp. pastoris CCMP1986
Brite
KEGG Orthology (KO) [BR:
pmm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmm03032
]
PMM1063 (gyrA)
03400 DNA repair and recombination proteins [BR:
pmm03400
]
PMM1063 (gyrA)
Enzymes [BR:
pmm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PMM1063 (gyrA)
DNA replication proteins [BR:
pmm03032
]
Prokaryotic type
DNA Topoisomerases
PMM1063 (gyrA)
DNA repair and recombination proteins [BR:
pmm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PMM1063 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
CAE19522
UniProt:
Q7V124
LinkDB
All DBs
Position
1002199..1004802
Genome browser
AA seq
867 aa
AA seq
DB search
MSDIVDSENSGLSENNDRIIQTDLRNEMSRSYLEYAMSVIVGRALPDARDGLKPVHRRIL
YAMYELGLTSGRPYRKCARVVGEVLGKYHPHGDTAVYDALVRMAQDFSMRMPLIDGHGNF
GSVDNDPPAAMRYTESRLQSLTDESLLEDIESETVDFSDNFDGSQQEPNVLPARIPQLLL
NGSSGIAVGMATNIPPHNLGELIDGLKAIIKNPSTEDKELFELIKGPDFPTGGQILGRDG
IKETFKSGKGSITMRGVADIEQIKSPGRAEKDAVIITELPFQTNKAALIERIADLVNEKR
LDGISDIRDESDRDGMRIVIELKRDAYPQVVLNNLFKITPLQNNFSANILALVNGEPTTL
SLRKMLDVFLEFRIETIKRRTSFLLRKAEERDHIIKGLLLALNAMDNIINLIRSAKDTNS
AREQLQNDHELSVIQADAILQMQLRRLTALEADKIKSEHDELTKKITDYKNILNDKERIN
EIILEELSKIDERFSSPRKTEILNLGGGLDDIDLIANERSVVLLTTAGYLKRMPVSEFES
TSRGSRGKAGTKNQQDDEVKLFISCNDHDTLLLFSDRGVAYALPAYRVPMSSRTAKGTPS
VQLLPIPREEQITSLVSVDSFDNECYLLMLTKAGFIKRTPLSAFSKVRSNGLIAINLEEG
DALTWVRLSTEGDSVLIGSSRGMTIHFRLDTNELRPLGRTARGVKSMNLKEGDKLVSMDV
LSCDLVDQLANLEEEDIENENEEDLESKSSNGPWILVASAFGLGKRVPVTKFRLQKRAGM
GLRAIKFRIKDDSLVGLKVLGEGEELLLVTERGVIVRTNADKISQQSRAATGVKLQRLDD
GDHLSEVVLVPHEQIEEDQLISNEEET
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatattgttgattctgagaattctggtttgagtgaaaataacgatcgaatcatt
cagactgatttaagaaatgagatgtcacgctcttatctagagtatgcgatgagtgttatc
gtcggacgtgctctccctgatgcaagagatggattaaagccagttcatagaaggatctta
tatgcgatgtatgagcttggtttaacaagcggtaggccatatagaaaatgtgcgagggta
gttggagaggttttaggaaagtaccatcctcatggagatactgctgtttacgatgcatta
gtacgtatggcacaggatttttctatgagaatgccattaattgatggacatgggaacttc
gggtccgtagataatgatccacctgccgcgatgagatatacagaatcacgtcttcaatcc
ctaacagatgaaagtttactcgaggatattgaatctgagactgtggatttttcagataat
tttgatggttcacaacaagaaccaaatgttttaccagctaggatcccccaactcctttta
aatggatcatcaggtattgctgttggaatggcaactaatatacccccgcataatttagga
gaattaatcgatggtcttaaagctataatcaaaaatccctcaacagaagataaagaactt
tttgaattaattaaaggcccagattttccaactggaggccagatactaggaagagatggt
atcaaagagaccttcaaatctgggaaagggtcaataactatgagaggggttgcagatatt
gaacaaatcaaatctcctggaagagcagaaaaagatgccgtaataattactgagcttcca
tttcaaactaataaagcagctcttatagaaagaatcgcagatctagtaaatgagaaaaga
ttagatgggatatcagatattagagatgaaagtgatagagatgggatgagaattgtaatt
gagcttaaaagagatgcctatcctcaagttgttctaaataatttatttaaaataacacct
ctacaaaataactttagtgcaaacattttagctcttgtcaacggagaacctacaaccctt
tctctcagaaaaatgctagatgtatttttagaatttagaattgaaacaatcaaaagaaga
acaagtttcttgttaagaaaagcagaggaaagagatcacattatcaaaggtcttctttta
gcacttaacgctatggataacattataaatttaataagatctgcaaaagatacgaattca
gcaagagaacaactgcaaaatgatcatgaattatctgtaattcaagcagatgcaatttta
caaatgcaattaagaagattaacagctttagaggcagataaaattaaatcagaacatgat
gaacttacaaaaaaaattacagattacaaaaatatattgaatgataaagagagaataaat
gaaattattcttgaagagcttagtaaaatagatgaaagattttcatctccgagaaaaaca
gagattctaaatttaggcggggggctagatgatattgacttaatagccaatgaaagatcc
gttgtcttattaactacagcaggatacttaaaaagaatgcctgtaagtgaattcgaatct
acaagcagaggatccagaggtaaagctggaacaaagaatcaacaagatgatgaagttaaa
ttatttataagctgcaatgaccatgacactcttctactttttagtgatcgaggggtagct
tatgcacttccagcatatcgagtacctatgagtagtagaacagctaaagggactccctct
gttcaactactcccaataccaagagaagaacaaatcacttctcttgtttcagtagattct
ttcgataacgagtgttatttattaatgctaaccaaagctggatttataaaaaggactcca
ctatctgccttttcaaaagtacgttcaaatggtttaatagcaattaatctagaagagggt
gatgctttaacttgggttagattatcaacagaaggagatagtgtcttaatcgggtcaagc
agaggaatgacaattcattttaggttagatactaatgaattaagacctcttgggagaact
gctagaggtgttaaatcaatgaacttaaaagaaggagataaacttgtttcaatggatgtt
ttaagttgtgacctggttgatcaattagcaaatcttgaagaggaagatattgaaaatgag
aatgaggaagatcttgaaagtaaatcttcaaatggaccatggattttagtagcaagtgct
tttggtcttgggaaaagagttccagttacaaaatttagattacaaaaacgtgcaggtatg
ggactaagagcaattaaattcagaatcaaagatgattcactcgtcggccttaaggttctt
ggagaaggtgaagaattacttttggttacagaaagaggcgtaattgtaagaactaatgcc
gataaaatctctcaacaatcaagagctgctacaggtgtaaagttacaaagactagatgat
ggagatcatttatccgaggttgtgttggttcctcatgaacaaattgaagaagatcaatta
atttcgaatgaagaagaaacttaa
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